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Table I Glycoside hydrolases analyzed in the work

From: GH97 is a new family of glycoside hydrolases, which is related to the α-galactosidase superfamily

Name

Family, subfamily

Organism

Accession numbera

Protein function (annotation)

Lengthb

97A1_BACTH    

GH97, 97a

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAC44671

alpha-glucosidase SusB

738

97A2_BACTH

GH97, 97a

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO79686

ORF: alpha-glucosidase

719

97A3_BACTH

GH97, 97a

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO75790

ORF: alpha-glucosidase

671

97B1_BACTH

GH97, 97b

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO76978

ORF: putative alpha-glucosidase

662

97B2_BACTH

GH97, 97b

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO78400

ORF: putative alpha-glucosidase

650

97B3_BACTH

GH97, 97b

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO77727

ORF: alpha-glucosidase

649

97B4_BACTH

GH97, 97b

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO78269

ORF: putative alpha-glucosidase

674

97C1_BACTH

GH97, 97c

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO78766

ORF: alpha-glucosidase

647

97C2_BACTH

GH97, 97c

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO78769

ORF: putative alpha-glucosidase

638

97E1_BACTH

GH97, 97e

Bacteroides thetaiotaomicron VPI-5482 = ATCC29148

AAO75239

ORF: putative alpha-glucosidase

644

97A1_BACFR

GH97, 97a

Bacteroides fragilis YCH46

BAD47941

ORF: alpha-glucosidase

719

97A2_BACFR

GH97, 97a

Bacteroides fragilis YCH46

BAD48072

ORF: alpha-glucosidase

671

97B1_BACFR

GH97, 97b

Bacteroides fragilis YCH46

BAD50730

ORF: putative alpha-glucosidase

649

97B2_BACFR

GH97, 97b

Bacteroides fragilis YCH46

BAD50235

ORF: putative alpha-glucosidase

649

97A1_TANFO

GH97, 97a

Tannerella forsythensis (Bacteroides forsythus) ATCC43037

AAO33827

alpha-D-glucosidase SusB

708

97A1_PREIN

GH97, 97a

Prevotella intermedia 17

(TIGR_246198)

ORF

733

97A1_PRERU

GH97, 97a

Prevotella ruminicola 23

(TIGR_264731)

ORF

737

97B1_PRERU

GH97, 97b

Prevotella ruminicola 23

(TIGR_264731)

ORF

645

97B2_PRERU

GH97, 97b

Prevotella ruminicola 23

(TIGR_264731)

ORF

658

97C1_PRERU

GH97, 97c

Prevotella ruminicola 23

(TIGR_264731)

ORF

621

97C2_PRERU

GH97, 97c

Prevotella ruminicola 23

(TIGR_264731)

ORF

639

97C3_PRERU

GH97, 97c

Prevotella ruminicola 23

(TIGR_264731)

ORF

645

97A1_SALRU

GH97, 97a

Salinibacter ruber DSM13855

(NC_006812)

ORF

708

97A1_AZOVI

GH97, 97a

Azotobacter vinelandii AvOP

EAM07225

ORF: alpha-glucosidase

673

97A1_XANAX

GH97, 97a

Xanthomonas axonopodis pv. citri 306

AAM37448

ORF: alpha-glucosidase

693

97D1_XANAX

GH97, 97d

Xanthomonas axonopodis pv. citri 306

AAM38156

ORF: alpha-glucosidase

654

97A1_XANCA

GH97, 97a

Xanthomonas campestris pv. campestris ATCC33913

AAM41744

ORF: alpha-glucosidase

692

97D1_XANCA

GH97, 97d

Xanthomonas campestris pv. campestris ATCC33913

AAM42433

ORF: alpha-glucosidase

654

97A1_MICDE

GH97, 97a

Microbulbifer (Saccharophagus) degradans 2–40

ZP_00315606

ORF: hypothetical protein

684

97B1_MICDE

GH97, 97b

Microbulbifer (Saccharophagus) degradans 2–40

ZP_00317369

ORF: hypothetical protein

679

97C1_MICDE

GH97, 97c

Microbulbifer (Saccharophagus) degradans 2–40

ZP_00317507

ORF: hypothetical protein

674

97C2_MICDE

GH97, 97c

Microbulbifer (Saccharophagus) degradans 2–40

ZP_00315142

ORF: hypothetical protein

661

97A1_SHEON

GH97, 97a

Shewanella oneidensis MR-1

AAN55484

ORF: alpha-glucosidase

699

97A1_SHEBA

GH97, 97a

Shewanella baltica OS155

EAN43632

ORF: alpha-glucosidase

710

97A1_SHEFR

GH97, 97a

Shewanella frigidimarina NCIMB400

EAN73178

ORF: alpha-glucosidase

697

97A1_SHEDE

GH97, 97a

Shewanella denitrificans OS-217

EAN70289

ORF: alpha-glucosidase

727

97A1_SHEAM

GH97, 97a

Shewanella amazonensis SB2B

EAN38820

ORF: alpha-glucosidase

676

97A1_NOVAR

GH97, 97a

Novosphingobium aromaticivorans DSM12444

ZP_00303588

ORF: transketolase

682

97A1_SPHAL

GH97, 97a

Sphingopyxis alaskensis RB2256

EAN45679

ORF: alpha-glucosidase

680

97D1_CAUCR

GH97, 97d

Caulobacter crescentus CB15

AAK22781

ORF: putative alpha-glucosidase

670

97A1_ERYLI

GH97, 97a

Erythrobacter litoralis HTCC2594

EAL74063

ORF: alpha-glucosidase

681

97E1_RHOBA

GH97, 97e

Rhodopirellula baltica SH1 (Pirellula sp. 1)

CAD78916

ORF: alpha-glucosidase

645

97C1_LEIXY

GH97, 97c

Leifsonia xyli subsp. xyli CTCB07

(NC_006087)*

ORF: similar to alpha-glucosidase

775*

97X1_SOLUS

GH97

Solibacter usitatus Ellin6076

EAM58489

ORF: hypothetical protein

619

97A1_HALMA

GH97, 97a

Haloarcula marismortui ATCC43049

AAV45265

ORF: alpha-glucosidase

1144

97A1_ANOGA

GH97, 97a

Anopheles gambiae str. PEST (African malaria mosquito)

(AAAB01006165)

ORF

380*

97A2_ANOGA

GH97, 97a

Anopheles gambiae str. PEST (African malaria mosquito)

(AAAB01064948)

ORF

209*

97A3_ANOGA

GH97, 97a

Anopheles gambiae str. PEST (African malaria mosquito)

(AAAB01020110)

ORF

231*

97A4_ANOGA

GH97, 97a

Anopheles gambiae str. PEST (African malaria mosquito)

(AAAB01068263)

ORF

229*

97A1_UNBAC

GH97, 97a

uncultured murine large bowel bacterium BAC31B

AAX16382

ORF: alpha-glucosidase

720

97A2_UNBAC

GH97, 97a

uncultured bacterium

(AY350337)

ORF

106*

97A1_ENSEQ

GH97, 97a

environmental sequence (cf. Shewanella SAR-1)

EAJ06144*

ORF: unknown

703

97A2_ENSEQ

GH97, 97a

environmental sequence (cf. Shewanella SAR-2)

EAI69763

ORF: unknown

699

97A3_ENSEQ

GH97, 97a

environmental sequence

EAJ75652

ORF: unknown

714

97A4_ENSEQ

GH97, 97a

environmental sequence

EAI51202

ORF: unknown

713

97A5_ENSEQ

GH97, 97a

environmental sequence

EAI80962

ORF: unknown

702*

97A6_ENSEQ

GH97, 97a

environmental sequence

EAH92811, EAI03708, EAD44407, EAG79875, EAH92819, EAI36772

ORF: unknown

711

97A7_ENSEQ

GH97, 97a

environmental sequence

EAJ99185, EAD99255, EAH48404, EAH57728, EAD83763, EAH04981, EAC91563, EAH85977, EAD11728

ORF: unknown

710

97A8_ENSEQ

GH97, 97a

environmental sequence

EAJ85380, EAH86891

ORF: unknown

669*

97C1_ENSEQ

GH97, 97c

environmental sequence

EAD85224*

ORF: unknown

218*

GH27_ORYSA

GH27, 27a

Oryza sativa japonica cultivar Nipponbare (rice)

BAB12570

alpha-galactosidase

417

GH36_LACPL

GH36, 36A

Lactobacillus plantarum ATCC8014

AAF02774

alpha-galactosidase MelA

738

GH31_ECOLI

GH31

Escherichia coli K12

AAC76680

alpha-xylosidase YicI

772

  1. aAccession numbers of protein sequences are given according to the NCBI database [72]. Numbers of nucleic sequences are given (in parentheses) if the corresponding protein sequences have not been deposited. In some cases (asterisked), protein sequences were edited by changing the start codon.
  2. bProtein length was established as the number of amino acids in the corresponding precursor. Incomplete sequences (protein fragments) are asterisked.