Table 2 GO terms significantly enriched toward low 2 kb upstream alignment scores. P-values are Bonferroni-corrected. b,m,c represents GO hierarchy (b:biological process, m:molecular function, and c:cellular component). mean: mean alignment score. The mean alignment score for all the genes analyzed is 411.01.
GO accession | GO term description | p-value | mean | # genes | |
|---|---|---|---|---|---|
GO:0005840 | c | ribosome | 2.74E-05 | 501.18 | 154 |
GO:0030529 | c | ribonucleoprotein complex | 2.69E-04 | 551.19 | 269 |
GO:0008270 | m | zinc ion binding | 3.03E-04 | 639.02 | 1089 |
GO:0003723 | m | RNA binding | 9.62E-04 | 579.31 | 410 |
GO:0003735 | m | structural constituent of ribosome | 1.21E-03 | 531.85 | 174 |
GO:0046914 | m | transition metal ion binding | 6.70E-03 | 647.13 | 1229 |
GO:0006952 | b | defense response | 1.86E-02 | 612.35 | 694 |
GO:0044249 | b | cellular biosynthesis | 2.00E-02 | 622.59 | 805 |
GO:0005739 | c | mitochondrion | 2.71E-02 | 610.17 | 529 |
GO:0003824 | m | catalytic activity | 3.43E-02 | 661.43 | 3900 |
GO:0009058 | b | biosynthesis | 3.92E-02 | 625.43 | 840 |