Table 3 ASAP coverage. Percentage coverage of the IR B region using ASAP method in 10 different genera and unique features of 4 diverse genera used in the study.
From: ASAP: Amplification, sequencing & annotation of plastomes
Percentage coverage of the IR region using ASAP | |||||
|---|---|---|---|---|---|
Species | Family | Round 1 (%) | Round 2 (%) | Round 3 (%) | Final |
Arabidopsis thaliana | Crucifereae | 100 | Â | Â | 100 |
Nicotiana tabacum | Solanaceae | 100 | Â | Â | 100 |
Citrus sinensis | Rutaceae | 100 | Â | Â | 100 |
Lycopersicon esculentum | Solanaceae | 59 | 100 | Â | 100 |
Prunus persica | Rosaceae | 7.4 | 100 | Â | 100 |
Amaranthus | Amaranthaceae | 81 | 100 | Â | 100 |
Lactuca sativa | Asteraceae | 63 | 100 | Â | 100 |
Fragaria × ananassa | Rosaceae | 74 | 89 | 100 | 100 |
Coleus × hybrida | Lamiaceae | 85 | 92 | N/A | 92 |
Zea mays | Poaceae | 40 | 80 | 100 | 100 |
Unique sps | Â | Â | Â | Â | Â |
Pisum sativum | Fabaceae | No Inverted Repeat | Â | Â | Â |
Ginkgo biloba | Ginkgoaceae | Small inverted repeat of 17 kb | Â | Â | Â |
Pinus taeda | Pinaceae | Gymnosperm | Â | Â | Â |
Equisetum hyemale | Equisetaceae | Pteridophyte | Â | Â | Â |