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Figure 4 | BMC Genomics

Figure 4

From: Automated SNP detection from a large collection of white spruce expressed sequences: contributing factors and approaches for the categorization of SNPs

Figure 4

ForestTreeDB screenshot showing the result from a query based on the Contig4486 (ID: 10387). This page displays the Gene Ontology terms associated to the contig and SNP data and the similarity data obtained by Hidden Markov Model searches against the domains and families available in the PFAM http://www.sanger.ac.uk/Software/Pfam/ and SMART http://smart.embl-heidelberg.de/ database. A SNP table displays four SNPs predicted by PolyBayes in Contig4486, with PSNP scores ranging from 0.89 to 0.98. Links also allow retrieval of the members (clones and ESTs) of the studied contig, their sequences, as well as the read alignment in a MSF format.

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BMC Genomics

ISSN: 1471-2164

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