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Table 3 Differences between ABI-Sanger sequences and sequence contigs assembled from 454 sequences in poly A or T homopolymers in 83,299 bp of compared sequence

From: 454 sequencing put to the test using the complex genome of barley

Motifa

total occurrencesb

differences

error rate

A5

242

8

3.3%

A6

90

10

11%

A7

33

11

33%

A8

16

8

50%

A9

7

3

43%

A10

2

0

0

A11

1

0

0

A13

1

0

0

  1. aAlso includes the complementary poly-T motifs.
  2. bNumber of motifs in the compared 89 kb region.