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Table 2 Presence of sequences involved in chromatin packaging in housekeeping and tissue specific genes.

From: Mining housekeeping genes with a Naive Bayes classifier

  Human Mouse Fruit fly
  All genes (%) HK (%) TS (%) All genes (%) HK (%) TS (%) All genes (%) HK (%) TS (%)
5' S/MAR 11 5 9 9 3 7 22 16 24
3' S/MAR 13 7 13 10 7 10 21 20 26
5' Poly(dA-dT) ≥ 12 bp 30 31 29 22 28 19 10 10 8
5' Poly(dA-dT) ≥ 15 bp 21 24 20 14 25 13 4 1 0
5' Poly(dA-dT) ≥ 18 bp 13 17 11 8 20 7 1 1 0
5' Poly(dA-dT) ≥ 20 bp 10 13 7 7 10 6 1 1 0
5' (CCGNN)2–5 22 47 20 19 27 12 15 10 16
  1. 5' = the sequence is present in the 1500 bp upstream the transcription start, 3' = the sequence is present in the 1500 bp downstream the transcription end, HK = housekeeping, TS = tissue specific.