Table 1 InterPro and Pfam mobile genetic element signature domains identified in P. falciparum and P. y. yoelii.
InterPro # (Pfam #) | InterPro Description | Plasmodium ORF |
|---|---|---|
IPR004244 (PF02994) | Transposase_22/L1 element | PY07579 (PORF1) |
IPR002104 (PF00589) | Phage integrase catalytic domain | MAL13P1.42 (hypothetical) PY04273 (hypothetical) |
IPR010998 | Lambda phage integrase-like domain | PY05943 (yir3 protein, putative), MAL13P1.42 (hypothetical), PY04273 (hypothetical) |
IPR001207 (PF00872) | Transposase, mutator type | PY07767 (transposase, mutator type) |
IPR003611 (PF07460) | Intron-encoded nuclease 2 | PFC0925w (hypothetical), PY00434 (hypothetical) |
IPR011940 | Meiotic recombinase | PY05593 (DNA repair protein rhp51), MAL8P1.76 (meiotic recombination protein dmc1-like) |
IPR011941 | DNA repair protein rad51 | PY03786 (rad51 homologue), PF11_0085 (rad51 homologue) |