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Table 2 Conserved syntenic regions with three or more gene pairs between the Arabidopsis genome and Prunus genetic maps.

From: Synteny conservation between the Prunus genome and both the present and ancestral Arabidopsis genomes

    

Peach

Group

# Pairs

Arabidopsis

Putative Function

EST Name

Linkage Group

gp15

3

AT1G02460

glycoside hydrolase family 28 protein

PP_LEa0030E14f

FxT-G3F

  

AT1G02130

Ras-related protein (ARA-5)

PP_LEa0010O05f

 
  

AT1G03000

AAA-type ATPase family protein

PP_LEa0001O24f

 

gp21

3

AT1G53750

26S proteasome AAA-ATPase subunit (RPT1a)

PP_LEa0010K05f

PxF-G6

  

AT1G54080

oligouridylate-binding protein

PP_LEa0012K19f

 
  

AT1G54110

cation exchanger, putative (CAX10) Ca2+

PP_LEa0007O07f

 

gp33

3

AT1G66540

cytochrome P450

PP_LEa0013L12f

TxE-G5

  

AT1G66250

glycosyl hydrolase family 17 protein

PP_LEa0012I12f

 
  

AT1G66680

S locus-linked protein

PP_LEa0003H24f

 

gp42

3

AT2G35330

zinc finger (C3HC4-type RING finger) protein

PP_LEa0017P13f

JxF-G7

  

AT2G35930

U-box domain-containing protein

PP_LEa0004C12f

 
  

AT2G36530

enolase

PP_LEa0003M24f

 

gp54

3

AT2G36530

enolase

PP_LEa0003M24f

TxE-G7

  

AT2G35930

U-box domain-containing protein

PP_LEa0004C12f

 
  

AT2G35330

zinc finger (C3HC4-type RING finger) protein-related

PP_LEa0017P13f

 

gp74

3

AT3G60340

palmitoyl protein thioesterase family protein

PP_LEa0012C18f

TxE-G5

  

AT3G60510

enoyl-CoA hydratase/isomerase family protein

PP_LEa0009I06f

 
  

AT3G60030

squamosa promoter-binding protein-like 12 (SPL12)

PP_LEa0002J03f

 

gp75

3

AT3G07160

glycosyl transferase family 48 protein

PP_LEa0004K19f

TxE-G5

  

AT3G06650

ATP-citrate synthase, ATP-citrate (pro-S-)-lyase

PP_LEa0005D13f

 
  

AT3G06880

transducin family protein

PP_LEa0009A14f

 

gp76

3

AT3G02770

dimethylmenaquinone methyltransferase

PP_LEa0030G03f

TxE-G5

  

AT3G01930

nodulin family protein similar to nodulin-like protein

PP_LEa0012O21f

 
  

AT3G02420

expressed protein

PP_LEa0037N22f

 

gp80

3

AT3G08560

vacuolar ATP synthase subunit E

PP_LEa0009M17f

TxE-G6

  

AT3G08710

thioredoxin family protein

PP_LEa0016G12f

 
  

AT3G08770

lipid transfer protein 6 (LTP6)

PP_LEa0029C22f

 

gp85

3

AT4G17720

RNA recognition motif (RRM)-containing protein

PP_LEa0027L14f

FxT-G2F

  

AT4G16900

disease resistance protein (TIR-NBS-LRR class)

PP_LEa0003A21f

 
  

AT4G17483

palmitoyl protein thioesterase family protein

PP_LEa0012C18f

 

gp98

3

AT4G17483

palmitoyl protein thioesterase family protein

PP_LEa0012C18f

TxE-G5

  

AT4G17486

expressed protein

PP_LEa0005J05f

 
  

AT4G17615

calcineurin B-like protein 1 (CBL1)

PP_LEa0009N08f

 

gp101

3

AT4G32450

pentatricopeptide (PPR) repeat-containing protein

PP_LEa0009C16f

TxE-G5

  

AT4G31970

cytochrome P450 family protein

PP_LEa0013L12f

 
  

AT4G31810

enoyl-CoA hydratase/isomerase family protein

PP_LEa0009I06f

 

gp106

3

AT5G61790

calnexin 1 (CNX1)

PP_LEa0006I23f

FxT-G1F

  

AT5G62310

incomplete root hair elongation (IRE)/protein kinase

PP_LEa0009I05f

 
  

AT5G62090

expressed protein

PP_LEa0030I08f

 

gp109

3

AT5G47350

palmitoyl protein thioesterase family protein

PP_LEa0012C18f

FxT-G2F

  

AT5G47710

C2 domain-containing protein contains

PP_LEa0011F23f

 
  

AT5G46870

RNA recognition motif (RRM)-containing protein

PP_LEa0027L14f

 

gp114

3

AT5G03520

Ras-related GTP-binding protein

PP_LEa0010O05f

FxT-G3F

  

AT5G03340

cell division cycle protein 48, putative/CDC48

PP_LEa0001O24f

 
  

AT5G03650

1,4-alpha-glucan branching enzyme

PP_LEa0009P15f

 

gp115

3

AT5G07990

flavonoid 3'-monooxygenase

PP_LEa0007M11f

FxT-G3F

  

AT5G07340

calnexin

PP_LEa0006I23f

 
  

AT5G08470

peroxisome biogenesis protein (PEX1)

PP_LEa0001O24f

 

gp126

3

AT5G08390

transducin family protein

PP_LEa0010I06f

TxE-G1

  

AT5G07990

flavonoid 3'-monooxygenase

PP_LEa0007M11f

 
  

AT5G07340

calnexin

PP_LEa0006I23f

 

gp128

4

AT5G47350

palmitoyl protein thioesterase family protein

PP_LEa0012C18f

TxE-G2

  

AT5G46870

RNA recognition motif (RRM)-containing protein

PP_LEa0027L14f

 
  

AT5G47810

phosphofructokinase family protein

PP_LEa0001K06f

 
  

AT5G47710

C2 domain-containing protein

PP_LEa0011F23f

 

gp132

3

AT5G47100

calcineurin B-like protein 9 (CBL9)

PP_LEa0009N08f

TxE-G5

  

AT5G47350

palmitoyl protein thioesterase family protein

PP_LEa0012C18f

 
  

AT5G47310

expressed protein

PP_LEa0005J05f

 

gp133

3

AT5G10840

endomembrane protein 70, putative TM4 family

PP_LEa0015M20f

TxE-G5

  

AT5G11110

sucrose-phosphate synthase

PP_LEa0003F22f

 
  

AT5G10430

arabinogalactan-protein (AGP4)

PP_LEa0008B15f

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