| | |
Only One Terminus2
|
Only Two Termini
|
At Least One Terminus
|
|---|
| |
Num1
|
5TSS
|
3TSS
|
5TNS
|
3TNS
|
5TSS+3TSS
|
5TNS+3TNS
|
5TSS+3TNS
|
5TNS+3TSS
|
5TSS
|
3TSS
|
5TNS
|
3TNS
|
|---|
|
3' reads
|
83,021 (48.2%)
|
730 (0.88%)
|
80 (0.10%)
|
21,901 (26.38%)
|
6,574 (7.92%)
|
2 (0.00%)
|
2,306 (2.78%)
|
1,654 (1.99%)
|
7 (0.01%)
|
4,473 (5.39%)
|
161 (0.19%)
|
24,929 (30.03%)
|
12,642 (15.2%)
|
|
5' reads
|
89,208 (51.8%)
|
3,078 (3.45%)
|
2,632 (2.95%)
|
346 (0.39%)
|
614 (0.69%)
|
120 (0.13%)
|
3 (0.00%)
|
1,238 (1.39%)
|
14 (0.02%)
|
4,760 (5.34%)
|
2,815 (3.16%)
|
393 (0.44%)
|
2,172 (2.43%)
|
|
Total
|
172,229 (100%)
|
3,808 (2.21%)
|
2,712 (1.57%)
|
22,247 (12.92%)
|
7,188 (4.17%)
|
122 (0.07%)
|
2,309 (1.34%)
|
2,892 (1.68%)
|
21 (0.01%)
|
9,233 (5.36%)
|
2,976 (1.73%)
|
25,322 (14.70%)
|
14,814 (8.60%)
|
- 1. Num stands for the number of sequence reads and percentage (in parentheses) of either the 3'-, or 5'-reads to the total number of reads.
- 2. 5TSS = 5' terminus in the sense strand, 3TSS = 3' terminus in the sense strand, 5TNS = 5' terminus in the non-sense strand and 3TNS = 3' terminus in the non-sense strand.
- All these data are retrievable through ConiferEST web interfaces (see Figure 3C, for example).
