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Figure 2 | BMC Genomics

Figure 2

From: Rice transposable elements are characterized by various methylation environments in the genome

Figure 2

Methylation degrees in the 5' flanking sequences of the 12 rice TEs. The TD bands smaller than 500 bp in the Msp I-digested samples were compared with those in the corresponding Hpa II-digested samples. Methylation degrees are expressed as the proportion of the methylated bands in the total bands of the Msp I-digested samples. The average methylation degree (24.3%) for the whole genomes from the nine strains was estimated by AFLP analyses as described in the Methods, and is indicated by a dotted line. Standard deviations were calculated with the data from the nine rice strains.

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