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Table 5 List of ORFs originally identified as specific for the North American Xylella fastidiosa (Xf) strains Ann-1 and Dixon, whose sequences have been found in the genomes of the Xf strains used in this study. The presence of sequences related to each ORF in the genomes of the strains analyzed by us is marked by an X.

From: Comparative genomic characterization of citrus-associated Xylella fastidiosa strains

ORFa

Identified in this study as

Putative function

187b

56a

9.12c

Cv21

Fb7

36f

Ann FY0184

GOE #17

Transcriptional regulator AbrB

X

X

  

X

 

Ann FY0185

GOE #127

Conserved hypothetical protein

   

X

  

Ann FY0934

GOE #19

Putative transposase TnA

X

X

    

Ann FY0977

GOE #133

Conjugation TrbI-like protein

   

X

  

Ann FY0978

GOE #23

Conserved hypothetical protein

X

 

X

   

Ann FY0979

GOE #16

Resolvase, N-terminal:Resolvase helix-turn-helix region

 

X

 

X

  

Ann FY0983

GOE #20

Helix-turn-helix motif

X

X

X

X

  

Ann FY0984

GOE #42

Conjugal transfer protein TrbG/VirB9/CagX

 

X

X

X

  

Ann FY0985

GOE #52

Conserved hypothetical protein

X

X

 

X

  

Ann FY0988

GOE #30

VirB8

X

X

 

X

  

Ann FY0989

GOE #02

TrbL/VirB6 plasmid conjugal transfer protein

X

X

X

X

 

X

Ann FY0992

GOE #63

Plasmid-related exported protein

   

X

 

X

Ann FY0993

GOE #26

Transferase hexapeptide repeat

X

 

X

X

  

Ann FY0996

GOE #07

Probable conjugal transfer protein TraL

X

X

X

  

X

Ann FY0997

GOE #59

Conserved hypothetical protein

 

X

X

X

 

X

Ann FY1071

GOE #56

Conserved hypothetical protein

X

X

X

X

X

X

Ann FY2430

GOE #68

Conserved hypothetical protein

  

X

X

  

Ann FY2499

GOE #62

Conserved hypothetical protein

  

X

  

X

Ann FY2513

GOE #116

Helix-turn-helix motif:Peptidase S24, S26A and S26B

X

     

Ann FY2526

GOE #31

type IV secretory pathway, VirB3 family protein

 

X

X

X

  

Ann FY2545

GOE #12

Conserved hypothetical protein

  

X

X

  

Ann FY2555

GOE #70

Conserved hypothetical protein

   

X

 

X

Ann FY3510

GOE #43

SpoVT/AbrB-like

 

X

X

   

Dixon FX0341

GOE #71

Helix-turn-helix motif: Peptidase S24, S26A and S26B

  

X

X

  

Dixon FX2654

GOE #107

Putative plasmid conjugal transfer protein TraJ

    

X

 

Dixon FX3105

GOE #96

Conserved hypothetical protein

    

X

 
  1. a As described by Doddapaneni and coworkers [22].