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Table 1

From: The human PINK1 locus is regulated in vivo by a non-coding natural antisense RNA during modulation of mitochondrial function

Annotation

Description

Sequence 5'-3'

A

PINK1 qRT-PCR forward primer

GGACACGAGACGCTTGCA

 

PINK1 MGB probe

TTTCGGCTGGAGGAGTA

 

PINK1 qRT-PCR reverse primer

TTACCAATGGACTGCCCTATCA

B

svPINK1 qRT-PCR forward primer

GGGAGTCGTCGATGTGTGGTA

 

svPINK1 MGB probe

AGGCCCTCTCCCCTC

 

svPINK1 qRT-PCR reverse primer

GGCGCAGGGTACAGGGATA

C

naPINK1 qRT-PCR forward primer

AGCATGCATTGTTGAAATAGCCTTT

 

naPINK1 qRT-PCR reverse primer

AGAGGAGACTACTTACCTGGTTCAAG

E

Northern forward primer

CCGCAAATGTGCTTCATCTA

 

Northern reverse primer

GGCTAGTCAGGAGGGAAACC

F

5' RACE outer primer

TCCCACTCCCGTAACTGAAC

 

5' RACE inner primer

TCCTCAGTCCAGCCTCATCT

G

RACE product internal forward primer

ATTGGGAGTCGTCGATG

 

RACE product internal reverse primer

CTCCATGCAGGGACATCA

H

AS siRNA 1 sense strand

GGAAGCUGUAGCUAGAACAUCUGUU

H

AS siRNA 1 antisense strand

AACAGAUCUUCUAGCUACAGCUUCC

I

AS siRNA 2 sense strand

CAGGUAAGUAGUCUCCUCUAUCAUU

I

AS siRNA 2 antisense strand

AAUGAUAGAGGAGACUACUUACCUG

J

S-PINK1 siRNA (spanning two exons) sense strand

GGAGAUCCAGGCAAUUUUUtt

J

S-PINK1 siRNA (spanning two exons) antisense strand

AAAAAUUGCCUGGAUCUCCtg