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Table 3 Proteins that are specific for Crenarchaeota

From: Phylogenomic analysis of proteins that are distinctive of Archaea and its main subgroups and the origin of methanogenesis

(a) Proteins specific to Crenarchaeota

APES019

[NP_147243]

ribonuclease p3

APE12412

[NP_147816]

COG4343

APE0488

[NP_147273]

COG4914

APE1561

[NP_148025]

COG4900

APE0503

[NP_147284]

COG4755

APE16273

[NP_148064]

CDD26669

APE05051

[NP_147285]

CDD26165

APE1644

[BAA80645]

 

APE0623

[NP_147373]

COG4888

APE1701

[NP_148108]

COG5494

APE0975

[NP_147640]

COG4879

   

(b) Proteins specific to Aeropyrum and Sulfolobus

APE0143

[NP_146996]

COG5491

APE1848

[NP_148210]

COG1259

APE0145

[NP_146997]

 

APE1936

[BAA80945]

 

APE0168

[NP_147017]

 

APE1966

[NP_148294]

 

APE0238

[NP_147072]

 

APE1996

[NP_148313]

 

APE0429

[NP_147222]

 

APE2102

[NP_148384]

 

APE0663

[NP_147399]

COG5431

APE2195

[NP_148451]

COG2083

APE0902

[NP_147588]

 

APE2325

[NP_148539]

 

APE1113

[NP_147720]

 

APE2340

[NP_148552]

 

APE1364

[NP_147897]

 

APE2435

[NP_148607]

COG4920

APE1626

[NP_148063]

 

APE2454

[BAA81469]

 

APE1817

[NP_148186]

COG5399

APE2463

[NP_148628]

 

(c) Proteins specific to Aeropyrum and Pyrobaculum

APE0106

[NP_146969]

 

APE1230

[NP_147806]

 

APE0730

[NP_147451]

 

APE1236

[NP_147812]

 

APE0874

[NP_147564]

 

APE2409

[NP_148589]

 

APE1194

[NP_147776]

COG5625

APE2602

[NP_148718]

 

APE1228

[NP_147804]

    

(d) Proteins specific to Sulfolobus and Pyrobaculum

Saci_0004

[YP_254727]

 

Saci_1129

[YP_255774]

 

Saci_0005

[YP_254728]

 

Saci_1813

[YP_256412]

COG4113

Saci_0035

[YP_254758]

 

Saci_1883

[YP_256481]

= Saci_1813

Saci_0223

[YP_254935]

CDD46009

Saci_2070

[YP_256657]

 

Saci_0224

[YP_254936]

= Saci_0223

Saci_2080

[YP_256667]

= Saci_1813

Saci_0660

[YP_255337]

 

Saci_2195

[YP_256774]

= Saci_0223

Saci_0857

[YP_255517]

 

Saci_2357

[YP_256931]

= Saci_0223

  1. The protein ID number starting with APE and Saci represents query protein from the genome of A. pernix K1 and S. acidocaldarius DSM 639. "=" means paralogous genes.
  2. Note 1. A low scoring homolog to APE0505 is also found in Ferroplasma acidarmanus Fer1. Note 2. A low scoring homolog to APE1241 is also found in Archaeoglobus fulgidus DSM 4304.
  3. Note 3. A low scoring homolog to APE1627 is also found in Aquifex aeolicus VF5.