|  |  |  | Microarray detection | rt-PCR detection | ||||
---|---|---|---|---|---|---|---|---|---|
 | Gene Name | Probe Set ID | BLAST of Consensus Probe Sequence OK? | %P of Mayo samples (n = 30) | Min Detection p-value | Max Detection p-value | %Detected in Mayo samples (n = 29) | Min Ct | Max Ct |
1 | TNF-α | 207113_s_at | Yes | 0.0% | 0.0806 | 0.3989 | 100% | 30.03 | 36.48 |
2 | IFNγ | 210354_at | Yes | 0.0% | 0.0562 | 0.5676 | 100% | 32.97 | 41.78 |
3 | IL-6 | 205207_at | Yes | 70.0% | 0.0007 | 0.1116 | 100% | 30.83 | 39.89 |
4 | IL-10 | 207433_at | Yes | 0.0% | 0.1116 | 0.6963 | 100% | 32.82 | 37.16 |
5 | TGF-β 1 |  |  |  |  |  |  |  |  |
 |  | 203085_s_at | Yes | 0.0% | 0.1497 | 0.9324 | 100% | 26.55 | 32.54 |
 |  | 203084_at | Yes | 0.0% | 0.1497 | 0.6338 | 100% | 26.55 | 32.54 |
6 | FoxP3 | Â | Â | Â | Â | Â | Â | Â | Â |
 |  | 224211_at | Yes | 0.0% | 0.2742 | 0.8286 | 100% | 30.87 | 37.22 |
 |  | 221333_at | NO a | 0.0% | 0.6655 | 0.9539 | - | - | - |
 |  | 221334_s_at | NO a | 0.0% | 0.0806 | 0.6655 | - | - | - |
7 | IFNγ-R1 |  |  |  |  |  |  |  |  |
 |  | 202727_s_at | Yes | 100.0% | 0.0002 | 0.0020 | 100% | 28.53 | 33.95 |
 |  | 242903_at | NO b | 100.0% | 0.0002 | 0.0376 | - | - | - |
 |  | 211676_s_at | Yes | 96.7% | 0.0007 | 0.0676 | 100% | 28.53 | 33.95 |