Table 1 Summary of Haemonchus contortus expressed sequence tags (ESTs) mined from public databases ([30, 31]) using the full length sequence of each of the 12 protein coding genes from the mitochondrial genome obtained via 454 technology in the present study.
Gene | Gene Length (bp) | ESTs | Read Length (bp) | Identitya |
|---|---|---|---|---|
nad1 | 879 | 10 | 118–586 | 95–99% |
nad2 | 846 | 10 | 266–437 | 92–99% |
nad3 | 336 | 2 | 193–229 | 97–98% |
nad4 | 1230 | 20 | 203–563 | 93–98% |
nad4L | 234 | 4 | 105–110 | 91–97% |
nad5 | 1582 | 31 | 237–597 | 96–99% |
nad6 | 447 | 11 | 124–347 | 90–100% |
cox1 | 1576 | 96 | 166–791 | 94–100% |
cox2 | 693 | 8 | 293–663 | 96–100% |
cox3 | 766 | 41 | 221–604 | 94–97% |
cytb | 1113 | 14 | 157–596 | 94–99% |
atp6 | 600 | 10 | 266–429 | 92–97% |