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Table 2 Pseudogenes described in ES114 version 2.0.

From: Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: Focus on point miscalls and artefactual expansions

Locus tag

Previous

Homolog

Defect in V. fischeriES114 versus MJ11

Target

VF_0198

VF0198, VF0199

ugd, UDP-glucose 6-dehydrogenase, capsule biosynthetic gene

+1 frameshift

108

VF_1268

VF1267, VF1268

umuC, DNA polymerase V subunit

amber nonsense codon and 5 bp repeat expansion

124

VF_A0141

VFA0141

putative transporter, NadC family protein

-1 frameshift

175

VF_A0270

VFA0270, VFA0271

transcriptional regulator, LysR family

amber nonsense codon

157

VF_A0466

VFA0466

N-acetylglucosaminyltransferase

-1 frameshift

177