Table 2 List of selected putative P. viticola TDFs expressed in planta
TDF | Primer Comb. | Lenght (bp) | Homology | Annotation | Blast score |
|---|---|---|---|---|---|
170 | TC – TG | 213 | Ps_004_22448_Jun03 | PROBABLE 50S RIBOSOMAL PROTEIN L1 [Sinorhizobium meliloti] | 6.00E-05 |
1272 | CT – TT | 72 | Pi_006_52843_Feb05 | 60S ribosomal protein L11 [Hyacinthus orientalis] | 2.00E-05 |
1214 | CT – AC | 400 | Ps_060_22857_Jun03 | 60S RIBOSOMAL PROTEIN L7A protein [Arabidopsis thaliana] | 7.00E-77 |
1390 | CG – TT | 114 | Pi_001_74169_Feb05 | RL35_EUPES 60S ribosomal protein L35 | 8.00E-09 |
1421 | CG – CA | 64 | Pi_015_57096_Feb05 | RL9_SPOFR 60S ribosomal protein L9 | 6.00E-05 |
1565 | CG – GT | 216 | Pi_004_46349_Feb05 | L-aspartate oxidase [Chromobacterium violaceum ATCC 12472] | 1.00E-05 |
1132 | CC – TG | 89 | Pi_001_82736_Feb05 | Nascent polypeptide associated complex alpha chain prot. [A. thaliana] | 6.00E-12 |
862 | CA – AA | 171 | Pi_030_51789_Feb05 | Polyubiquitin [Plasmodium falciparum 3D7] | 5.00E-20 |
1228 | CT – AC | 89 | Ps_016_22726_Jun03 | Ubiquitin-conjugating enzyme e2-16 kd [S. pombe] | 6.00E-09 |
1135 | CC – TG | 81 | Pi_003_44814_Feb05 | Actin depolymerizing factor – like protein [A. thaliana] | 5.00E-09 |
1484 | CT – GC | 127 | Pi_002_46251_Feb05 | Fructose-1 6-biphosphatase [Phytophthora infestans] | 5.00E-04 |
160 | TC – TC | 174 | Ps_016_22911_Jun03 | Myo-inositol-1-phosphate synthase [Nicotiana paniculata] | 2.00E-22 |
83 | TC – AC | 240 | Ps_005_22630_Jun03 | Putative succinate dehydrogenase flavoprotein subunit [A. thaliana] | 4.00E-12 |
394 | TG – AC | 277 | Ps_001_26384_Jun03 | Putative steroid binding protein [A. thaliana] | 1.00E-12 |
241 | TA – AC | 288 | Pi_004_52230_Feb05 | Fatty acid synthase, subunit alpha – fission yeast (S. pombe) | 1.00E-31 |
1604 | TT – TG | 81 | Ps_029_22780_Jun03 | 14-3-3 protein epsilon [Xenopus laevis] | 3.00E-07 |
875 | CA – AT | 203 | Pi_003_45566_Feb05 | ATPase, H+ transporting [Gallus gallus] | 6.00E-14 |
1366 | CG – AG | 129 | Ps_001_28794_Jun03 | Putative beta-subunit of K+ channels [Solanum tuberosum] | 5.00E-07 |
689 | CA – GC | 422 | Ps_018_22812_Jun03 | Mn superoxide dismutase [Chlamydomonas reinhardtii] | 1.00E-105 |
542 | TG – CG | 170 | Pi_018_51411_Feb05 | Mitochondrial Mn3+ Superoxide Dismutase | 4.00E-30 |
794 | TC – GT | 256 | Ps_040_22917_Jun03 | Homology to G protein beta subunit [Chlamydomonas reinhardtii] | 1.00E-21 |
1410 | CG – TG | 289 | Pi_005_48934_Feb05 | C3HC4-type RING zinc finger protein-like [Oryza sativa ] | 5.00E-12 |
270 | TA – TA | 182 | Pi_009_51114_Feb05 | GTP-binding protein ora3 – [Gallus gallus] | 5.00E-05 |
239 | TA – AC | 92 | Pi_001_76149_Feb05 | NADH2 dehydrogenase (ubiquinone) [Canis familiaris] | 1.00E-13 |
292 | TA – TC | 87 | Pi_004_51216_Feb05 | Probable atrazine chlorohydrolase [Chromobacterium violaceum ] | 3.00E-07 |
1274 | CT – TC | 397 | Pi_001_66405_Feb05 | Putative citrate synthase [Saccharomyces kluyveri] | 5.00E-81 |
552 | TA – GA | 222 | Pi_002_43637_Feb05 | Putative nuclear LIM interactor-interacting prot. [Phytophthora sojae] | 3.00E-10 |
1010 | CA – CC | 521 | Pi_003_48725_Feb05 | S28245 NADH2 dehydrogenase (ubiquinone) | 2.00E-34 |
208 | TT – TA | 64 | Pi_004_48444_Feb05 | T52339 ADP-ribosylation factor – pepper | 6.00E-11 |
826 | TC – GG | 291 | Pi_028_48244_Feb05 | Vacuolar H+-pyrophosphatase [Prunus persica] | 2.00E-58 |