Major histocompatibility complex (Mhc) class Ib gene duplications, organization and expression patterns in mouse strain C57BL/6

Table 1 List of gene specific primer sets used for expression pattern analysis

Gene	Primer set		Size (bp)
	Forward	Reverse
H2-K1	GGGAGCCCCGGTACATGGAA	GGTGACTTTATCTTCAGGTCTGCT	548
H2-D1	TCGGCTATGTGGACAACAAGG	GGCCATAGCTCCAAGGACAC	818
H2-Q1	CTGCGGTATTTCGAGACCTCG	GGTATCTGTGGAGCCACATCAG	502/686
H2-Q2	ACACACAGGTCTCCAAGGAA	TGGATCTTGAGCGTAGTCTCTTA	785
H2-Q4	CTTGCTGAGTTATTTCTACACCT	ACCGTCAGATCTGTGGTGACAT	583
H2-Q5	GGGAGCCCCGGTTCATCATC	CAGGGTGACAGCATCATAAGATA	539
H2-Q6	GTATTTCCACACTGCTGTGTCCT	AAGGACAACCAGAATAGCTACGT	871
H2-Q7	CGGGCCAACACTCGCTGCAA	GTATCTGCGGAGCGACTGCAT	515
H2-Q10	CACACTCCATGAGGTATTTCGAA	CAGATCAGCAATGTGTGACATGATA	590/866
H2-T24	ATGCACAGTACTTCACTCATG	CCCCTAGCATATACTCCTGTCG	736/839
H2-T23	AGTATTGGGAGCGGGAGACTT	AGCACCTCAGGGTGACTTCAT	438
H2-T22	CTGGAGCAGGAGGAAGCAGATA	CAAATGATGAACAAAATGAAAACCA	698
H2-T15	ACCGCCCTGGCCCCGACCCAA	CATCCGTGCATATCCTGGATT	332
H2-T13	GCCCTGACTATGATCGAGACT	CACCTCAGGGTGACATCACCTG	635
H2-T11	CGGTATTTCCACACCGTCGTA	TAGAGATATGCGAGGCTAAGTTG	415/628
H2-T10	CCCTTTGGGTTCACACTCGCTT	CCTGGTCTCCACAAACTCCACTTCT	661
H2-T9	ACCGCCCTGGCCCCGACCCGA	CATCCGTGCATATCCTGGATA	332
H2-T7	CTTCACACGTTCCAGCTGTTGTT	AGGCCTGGTCTCCACAAGCTCT	432
H2-T5	GGTGGTGTTGCAGAGACGCT	CTGCTCTTCAACACAAAAGG	482
H2-T3	TTCAACAGCTCAGGGGAGACTG	AAGCTCCGTGTCCTGAATCAAT	585
H2-M3	CAGCGCTGTGATAGCATTGA	ACAACAATAGTGATCACACCT	806
H2-M2	GAGGAGACCCACTACATGACTGTT	GAAAATGAAAGACTGAGGAGGTCTAC	798
b2 m*	ATGGCTCGCTCGGTGACCCTG	ATTGCTCAGCTATCTAGGATA	546
GAPDH*	TGAAGGTCGGTGTGAACGGATTTG	GGCCTTCTCCATGGTGGTGAAGAC	314

ISSN: 1471-2164