Gene Name* | Gene Symbol | qt realtime RT-PCR | GeneChip | RT-PCR primer/probe ID*** | |
---|---|---|---|---|---|
Fold change** | p value | significant difference | GeneChip Probe Set ID | ||
Type 1 interferon-regulatory factors | |||||
interferon regulatory factor 1 (IRF1) | Irf1 | 1.00 | - | - | Mm00515191_m1 102401_at |
interferon regulatory factor 3 (IRF3) | Irf3 | 1.06 | 0.479 | - | Mm00516779_m1 99103_at |
interferon regulatory factor 5 (IRF5) | Irf5 | 2.38 | 0.112 | - | Mm00496477_m1 93425_at |
interferon regulatory factor 6 (IRF6) | Irf6 | 1.50 | 0.363 | - | Mm00516797_m1 92440_at |
interferon regulatory factor 7 (IRF7) | Irf7 | 2.44 | 0.031 | + | Mm00516788_m1 104669_at |
interferon dependent positive acting transcription factor 3 gamma(IRF9) | Isgf3g | 2.53 | 0.001 | - | Mm00492679_m1 103634_at |
interferon consensus sequence binding protein 1(IRF8) | Irf8 | 1.11 | 0.299 | - | Mm00492567_m1 98002_at |
Type 1 interferon-inducible genes | |||||
interferon-induced protein with tetratricopeptide repeats 1 | Ifit1 | 5.22 | 0.048 | + | Mm00515153_m1 100981_at |
interferon-induced protein with tetratricopeptide repeats 2 | Ifit2 | 0.82 | 0.861 | + | Mm00492606_m1 103639_at |
glucocorticoid-attenuated response gene 49 (GARG-49/IRG2) | Ifit3 | 1.99 | 0.195 | - | Mm01704846_s1 93956_at |
guanylate nucleotide binding protein 2:mGBP-2 | Gbp2 | 2.83 | 0.091 | + | Mm00494575_m1 104597_at |
expressed sequence AI481100:GTPI | Iigp2 | 2.11 | 0.060 | + | Mm00546343_s1 96764_at |
chemokine (C-X-C motif) ligand 10:IP-10 | Cxcl10 | 4.69 | 0.058 | - | Mm00445235_m1 93858_at |
interferon inducible protein 1:LRG-47, Ifi1 | Irgm | 6.30 | 0.188 | + | Mm00492596_m1 97409_at |
lectin, galactose binding, soluble 9 | Lgals9 | 1.96 | 0.023 | + | Mm00495295_m1 103335_at |
interferon gamma induced GTPase | Igtp | 2.95 | 0.012 | + | Mm00497611_m1 160933_at |
Type I interferon receptors | |||||
interferon (alpha and beta) receptor 1 | Ifnar1 | 0.29 | 0.424 | - | Mm00439544_m1 100483_at |
interferon (alpha and beta) receptor 2 | Ifnar2 | 1.12 | 0.599 | + | Mm00494916_m1 101014_at |
Complement-related genes | |||||
complement component 1, q subcomponent, alpha polypeptide | C1qa | 2.24 | 0.105 | + | Mm00432142_m1 98562_at |
complement component 3 | C3 | 2.74 | 0.059 | + | Mm00437858_m1 93497_at |
serine (or cysteine) proteinase inhibitor, clade G, member 1:complement 1 inhibitor | Serping1 | 1.41 | 0.070 | + | Mm00437834_m1 99081_at |
MHC-related genes | |||||
Histocompatibility 2, class II antigen A, alpha | H2-Aa | 1.73 | 0.197 | + | Mm01609331_m1 92866_at |
MHC class II H2-I-A-beta gene (k haplotype) | H2-AB1 | 1.82 | 0.022 | + | H2-AB1-TG04 100998_at |
MHC (A.CA/J(H-2K-f) class I antigen | H2-Q1 | 0.88 | 0.496 | + | Mm00657093_g1 97125_f_at |
MHC class I Q4 beta-2-microglobulin (Qb-1) gene | H2-Q4 | 1.65 | 0.008 | - | H2-Q4-TG09 99378_f_at |
Q8/9d gene | LOC386462 | 2.22 | 0.017 | + | H2-Q78-TG08 98438_f_at |
Histocompatibility 2, T region locus 10+17 | H2-T10/22/9 | 1.74 | 0.114 | + | H2-T1017-TG11 93865_s_at |
Histocompatibility 2, T region locus 23 | H2-T23 | 1.35 | 0.116 | + | Mm00439246_g1 98472_at |
Other molecules | |||||
cytotoxic T lymphocyte-associated protein 2 alpha | Ctla2a | 5.17 | 0.002 | + | Mm00484032_g1 96912_s_at |
CD52 antigen:CD80? | Cd52 | 2.40 | 0.029 | + | Mm00489055_m1 104606_at |