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Figure 7 | BMC Genomics

Figure 7

From: Multiple expressed MHC class II loci in salmonids; details of one non-classical region in Atlantic salmon (Salmo salar)

Figure 7

Phylogeny of teleost MHC class II beta sequences. Phylogenetic tree analysis by NJ method for full-length amino acid sequences. Consensus trees were based on 1000 bootstrap replications and reported with the bootstrap support values (in percent) indicated above the respective nodes. Sequence references are as follows: Sasa-DAB [GenBank: CAD27784], Sasa-DBB [GenBank: DY726096], Onmy-DAB [GenBank: AAA79133], Onmy-DBB [GenBank: AAD53026], Orla-DAB [GenBank: BAA94279], Orla-DBB [GenBank: BAA94280], Xima-DAB [GenBank: AAC05652], Gaac-DAB [GenBank: AAU01918], Gaac-DBB [GenBank: AAU01920], Gaac-EST [Genbank: DN681207], Dila-DAB [GenBank: ABH09450], Fuhe-EST1 [GenBank: CN976662], Fuhe-EST2 [GenBank: CN984097], Taru-EST [GenBank: CA846190], Icpu-DAB [GenBank: AAB67871], Cyca-DAB [GenBank: CAA64709], Dare-DAB [GenBank: NP_571551], Dare-DCB [GenBank: CAD56804], Dare-DDB [GenBank: AAA87893], Dare-EST [Genbank: CK126567], Pipr-EST1 [GenBank: DT084791], Pipr-EST2 [GenBank: DT351641], Pipr-EST3 [GenBank: DT139435], Pipr-EST4 [GenBank: DT355684], Ximu-DXB [GenBank: AAS55041], Gici-DAB [GenBank: AAF82681] and HLA_DRB1 [GenBank: AAA59781].

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BMC Genomics

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