Table 1 SIDER2 elements present in the L. infantum chromosome 32 and comparison with their homologues in L. major
L. infantum SIDER2 element | L. major SIDER2 homologue | |||||
|---|---|---|---|---|---|---|
Namea | Subfamily | Size (%G+C) | 79-bp signatureb | Namec | Size (%G+C) | Sequence identity (%) |
32-18439r | A | 560 (68.4) | 2b | 32-16072r | 546 (67.4) | 83 |
32-30662r | A | 560 (68.9) | 2b | 32-28347r | 549 (67.2) | 82 |
32-39696d | A | 570 (70.4) | 2b | 32-37464d | 541 (64.3) | 69 |
32-46425r | A | 570 (70.0) | 2a | 32-44074r | 547 (67.8) | 81 |
32-72349d | A | 568 (70.4) | 2b | 32-70108d | 550 (69.3) | 82 |
32-84516r | A | 546 (70.5) | 2b | 32-82363r | 550 (68.7) | 81 |
32-121058r | A | 550 (69.6) | 2b | 32-119100r | 518 (64.5) | 76 |
32-127617r | A | 515 (69.7) | 2b | 32-125634r | 515 (63.5) | 74 |
32-169517r | B | 564 (64.0) | 2a | 32-168081r | 568 (64.1) | 87 |
32-185886r | B | 564 (64.2) | 2a | 32-184597r | 569 (64.2) | 87 |
32-222503d | C | 594 (66.3) | 2b | 32-221358d | 555 (68.7) | 84 |
32-232971d | C | 578 (67.0) | 2b | 32-231497d | 582 (69.1) | 85 |
32-253342d | C | 578 (67.5) | 2b | 32-252118d | 578 (68.9) | 86 |
32-311078r | 535 (61.7) | 2b | 32-308193r | 601 (59.6) | 79 | |
32-354985d | D | 586 (63.5) | 2b | 32-351852d | 574 (62.5) | 87 |
32-367858d | D | 590 (63.6) | 2b | 32-364746d | 574 (62.9) | 86 |
32-420911d | E | 540 (68.0) | 32-413631d | 561 (67.7) | 84 | |
32-456060d | E | 556 (67.8) | 32-448879d | 566 (67.3) | 85 | |
32-460150r | E | 555 (67.8) | 32-452988r | 562 (67.6) | 86 | |
32-520410d | F | 661 (68.4) | 32-515291d | 663 (70.7) | 78 | |
32-542863d* | F | 422 (68.5) | 32-537679d | 579 (71.7) | 59 | |
32-546470r | F | 679 (68.3) | 32-541585r | 662 (71.0) | 77 | |
32-588727r | F | 588 (66.7) | 32-584100r | 528 (70.6) | 73 | |
32-598168r | F | 597 (68.2) | 32-593579r | 565 (69.4) | 80 | |
32-642986d* | F | 461 (68.6) | 32-638510d | 542 (68.3) | 62 | |
32-661708r | 552 (64.7) | 2b | 32-657337r | 404 (62.8) | 62 | |
32-726312r | G | 490 (66.9) | 2b | 32-722841r | 453 (66.7) | 83 |
32-734536r | G | 489 (68.5) | 2b | 32-731206r | 556 (66.7) | 73 |
32-752616r | G | 492 (67.9) | 2b | 32-749267r | 540 (66.7) | 78 |
32-755765r | G | 491 (68.8) | 2b | 32-752467r | 553 (66.2) | 75 |
32-769406r | 441 (61.0) | 32-766145r | 569 (57.8) | 69 | ||
32-772687r | 425 (60.9) | 32-769534r | 408 (60.5) | 80 | ||
32-775723r* | H | 265 (65.3) | 32-772586rd | 430 (66.5) | 54 | |
32-794401r | H | 603 (63.2) | 2b | 32-790497r | 577 (62.9) | 86 |
32-802492r | H | 550 (63.8) | 2b | 32-798632r | 541 (64.5) | 86 |
32-808837r | H | 550 (64.0) | 2b | 32-804952r | 541 (64.7) | 87 |
32-827594d | H | 591 (62.4) | 2b | 32-824177d | 581 (63.0) | 91 |
32-881720r | I | 570 (66.7) | 2b | 32-877913r | 581 (65.4) | 90 |
32-890515r | I | 573 (66.8) | 2b | 32-886987r | 584 (65.2) | 90 |
32-919839r | J | 623 (70.0) | 32-916263r | 502 (69.5) | 74 | |
32-937896d | J | 507 (70.6) | 32-934324d | 600 (69.7) | 75 | |
32-953057r | J | 623 (70.0) | 32-949068r | 600 (69.5) | 88 | |
32-991979r | K | 614 (65.3) | 2b | 32-988462r | 594 (65.3) | 86 |
32-1017837r | K | 614 (65.2) | 2b | 32-1014737r | 594 (65.3) | 85 |
32-1128071r | 506 (63.4) | 2b | 32-1125938r | 519 (62.0) | 88 | |
32-1141454r | 404 (60.4) | 32-1167639d | 367 (61.6) | 52 | ||
32-1172151d | L | 506 (67.8) | 32-1169025dd | 367 (70.6) | 67 | |
32-1195026d | L | 602 (66.5) | 32-1191646d | 618 (68.0) | 87 | |
32-1219109r | L | 602 (66.6) | 32-1215657r | 618 (67.8) | 89 | |
32-1284330d | 458 (65.9) | 2b | 32-1278797d | 559 (63.9) | 74 | |
32-1405232d | 467 (64.9) | 2b | 32-1399746d | 468 (63.9) | 74 | |
32-1496187d | M | 497 (66.4) | 2a | 32-1509833d | 411 (66.4) | 60 |
32-1532945d* | M | 365 (68.2) | 32-1546424d | 409 (65.8) | 79 | |
32-1545347d | 513 (61.6) | 2b | 32-1558844d | 457 (62.1) | 68 | |