From: The RHNumtS compilation: Features and bioinformatics approaches to locate and quantify Human NumtS
NumtS Code | Chr | Strand | Mt Start | Mt End | Mt fragment length | Nuc Start | Nuc End | Chr fragment length | Difference | Quality Score |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | + | 3914 | 9755 | 5842 | 554327 | 560167 | 5840 | 3 | 4 |
3 | 1 | - | 6060 | 9316 | 3257 | 107146786 | 107150029 | 3243 | 15 | 1.25 |
4 | 1 | - | 1051 | 3162 | 2112 | 120286496 | 120288780 | 2284 | 173 | 0.75 |
9 | 1 | - | 9782 | 13593 | 3812 | 233768514 | 233772288 | 3774 | 39 | 1.75 |
10 | 1 | - | 636 | 6189 | 5554 | 236170699 | 236176250 | 5551 | 4 | 1.75 |
11 | 1 | - | 12218 | 16563 | 4346 | 236177249 | 236181582 | 4333 | 14 | 1.75 |
14 | 2 | + | 12220 | 16475 | 4256 | 82896241 | 82900506 | 4265 | 10 | 1.75 |
19 | 2 | + | 596 | 5892 | 5297 | 117495259 | 117500547 | 5288 | 10 | 3.25 |
20 | 2 | + | 9196 | 13574 | 4379 | 120685762 | 120690928 | 5166 | 788 | 1.75 |
22 | 2 | + | 3799 | 15354 | 11556 | 130745853 | 130757329 | 11476 | 81 | 2 |
23 | 2 | - | 10657 | 15398 | 4742 | 131843104 | 131847799 | 4695 | 48 | 1.75 |
24 | 2 | - | 3799 | 10519 | 6721 | 131853669 | 131860205 | 6536 | 186 | 1.5 |
25 | 2 | - | 598 | 5892 | 5295 | 140691291 | 140698242 | 6951 | 1657 | 3.5 |
27 | 2 | - | 9166 | 16563 | 7398 | 143566386 | 143574013 | 7627 | 230 | 1.75 |
30 | 2 | + | 11801 | 15067 | 3267 | 155875844 | 155879111 | 3267 | 1 | 2 |
33 | 2 | - | 10440 | 13131 | 2692 | 201785264 | 201787949 | 2685 | 8 | 2 |
34 | 2 | + | 6966 | 11240 | 4275 | 203187200 | 203191742 | 4542 | 268 | 2 |
36 | 2 | - | 596 | 3105 | 2510 | 212346765 | 212349578 | 2813 | 304 | 1.75 |
37 | 2 | + | 4854 | 7590 | 2737 | 212350179 | 212352885 | 2706 | 32 | 1.5 |
58 | 3 | - | 6604 | 9316 | 2713 | 89718693 | 89721366 | 2673 | 41 | 2 |
61 | 3 | - | 9787 | 12340 | 2554 | 108095676 | 108098627 | 2951 | 398 | 1.25 |
62 | 3 | + | 13536 | 15573 | 2038 | 108100533 | 108101514 | 981 | 1058 | 1.5 |
71 | 4 | - | 9781 | 12301 | 2521 | 25328634 | 25331437 | 2803 | 283 | 1.75 |
76 | 4 | - | 9485 | 16561 | 7077 | 65155336 | 65160181 | 4845 | 2233 | 1.75 |
79 | 4 | + | 596 | 3105 | 2510 | 117438367 | 117440855 | 2488 | 23 | 1.75 |
81 | 4 | - | 672 | 15325 | 14654 | 156592474 | 156607061 | 14587 | 68 | 3.5 |
88 | 5 | - | 341 | 2697 | 2357 | 79981597 | 79983943 | 2346 | 12 | 4.75 |
89 | 5 | + | 12662 | 16124 | 3463 | 93928917 | 93932379 | 3462 | 2 | 5 |
91 | 5 | - | 6117 | 15183 | 9067 | 99409541 | 99418648 | 9107 | 41 | 4.5 |
94 | 5 | - | 10270 | 15488 | 5219 | 134286898 | 134292116 | 5218 | 2 | 5 |
97 | 6 | + | 8437 | 10622 | 2186 | 92493159 | 92493750 | 591 | 1596 | 1.5 |
100 | 6 | + | 7451 | 11649 | 4199 | 154028400 | 154032608 | 4208 | 10 | 1.75 |
102 | 7 | + | 8505 | 15238 | 6734 | 57238827 | 57245471 | 6644 | 91 | 3.75 |
103 | 7 | + | 3819 | 15924 | 12106 | 57257414 | 57269467 | 12053 | 54 | 6 |
104 | 7 | - | 3117 | 11880 | 8764 | 63201998 | 63210482 | 8484 | 281 | 1.5 |
105 | 7 | - | 5513 | 8246 | 2734 | 68433640 | 68436926 | 3286 | 553 | 1.75 |
106 | 7 | + | 13065 | 15369 | 2305 | 111799937 | 111802234 | 2297 | 9 | 2 |
107 | 7 | - | 2793 | 6553 | 3761 | 141147677 | 141151744 | 4067 | 307 | 2 |
108 | 7 | + | 600 | 3095 | 2496 | 142052596 | 142055088 | 2492 | 5 | 2.25 |
110 | 8 | + | 636 | 4888 | 4253 | 32988565 | 32992739 | 4174 | 80 | 1.5 |
113 | 8 | - | 656 | 4880 | 4225 | 47858273 | 47861837 | 3564 | 662 | 4 |
114 | 8 | - | 9176 | 16569 | 7394 | 68655653 | 68662552 | 6899 | 496 | 1.75 |
117 | 8 | + | 1013 | 7114 | 6102 | 104164459 | 104171823 | 7364 | 1263 | 3.5 |
120 | 9 | + | 1294 | 13574 | 12281 | 5082095 | 5100699 | 18604 | 6324 | 1.5 |
121 | 9 | + | 598 | 3093 | 2496 | 33646633 | 33649128 | 2495 | 2 | 1.5 |
125 | 9 | - | 4773 | 6873 | 2101 | 82368550 | 82370501 | 1951 | 151 | 1.75 |
126 | 9 | + | 9202 | 11598 | 2397 | 93911111 | 93913772 | 2661 | 265 | 3.25 |
128 | 10 | + | 2417 | 4831 | 2415 | 20075681 | 20077114 | 1433 | 983 | 2.25 |
131 | 10 | + | 636 | 3105 | 2470 | 57027643 | 57030440 | 2797 | 328 | 1.5 |
132 | 10 | - | 3821 | 7698 | 3878 | 71020912 | 71025687 | 4775 | 898 | 1.75 |
134 | 11 | - | 577 | 2972 | 2396 | 10486010 | 10488403 | 2393 | 4 | 6 |
140 | 11 | + | 9820 | 15243 | 5424 | 80940264 | 80945683 | 5419 | 6 | 1.75 |
142 | 11 | - | 724 | 9666 | 8943 | 102778067 | 102786933 | 8866 | 78 | 3.25 |
150 | 13 | + | 13052 | 16472 | 3421 | 95142796 | 95146598 | 3802 | 382 | 1.5 |
156 | 14 | + | 11367 | 15325 | 3959 | 83708940 | 83713093 | 4153 | 195 | 1.75 |
158 | 15 | + | 9786 | 15318 | 5533 | 56229853 | 56235023 | 5170 | 364 | 1.5 |
159 | 16 | - | 2468 | 7683 | 5216 | 3357487 | 3362068 | 4581 | 636 | 3.5 |
160 | 16 | - | 8688 | 15327 | 6640 | 10720543 | 10726494 | 5951 | 690 | 1.5 |
164 | 17 | - | 596 | 5979 | 5384 | 19442485 | 19449425 | 6940 | 1557 | 3.5 |
165 | 17 | + | 14365 | 16569 | 2205 | 21942648 | 21944853 | 2205 | 1 | 3.75 |
166 | 17 | + | 1 | 11112 | 11112 | 21944854 | 21955968 | 11114 | 3 | 3.5 |
171 | 20 | - | 649 | 4038 | 3390 | 55366111 | 55369449 | 3338 | 53 | 3.5 |
174 | X | - | 581 | 5892 | 5312 | 55221910 | 55227180 | 5270 | 43 | 4 |
175 | X | + | 1049 | 3161 | 2113 | 61976282 | 61978565 | 2283 | 171 | 1.75 |
182 | X | + | 1054 | 4415 | 3362 | 142345841 | 142349570 | 3729 | 368 | 1.75 |
184 | Y | + | 596 | 4477 | 3882 | 8294669 | 8300289 | 5620 | 1739 | 1.25 |