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Table 3 Extent of transcript support for annotated potato genes among the Solanaceae transcriptome dataset.

From: Analysis of 90 Mb of the potato genome reveals conservation of gene structures and order with tomato but divergence in repetitive sequence composition

No. Speciesa

No. Loci

 

Including Potato TAb

Excluding Potato TAc

1

63

50

2

36

32

3

26

31

4

28

19

5

18

11

6

11

6

7

6

3

8

3

0

9

0

1

10

1

0

Total

192

153

  1. a Potato genes (loci) were searched against 13 Solanaceae Transcript Assemblies (TA, see Additional Data File 3) datasets as described in the Materials and Methods.
  2. b The number of loci that aligned with TAs from 1–10 different Solanaceae species including the Potato TA dataset is reported.
  3. c The number of loci that aligned with TAs from 1–10 different Solanaceae species excluding the Potato TA dataset is reported.