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Table 2 Using sorted chromosomes 1H and 2H – 7H to determine chromosome location of ambiguously mapped loci

From: Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley

Locus name

Morex × Barke

OWBs

Steptoe × Morex

Allele call Akcent

Allele call 1H

Allele call 2H-7H

Ratio of GenCall scorea

Chrom.b

1_0198

1H

1H

5H

B

B

B

488

1H

1_0716

1H

3H

3H

A

A

A

479

1H

1_0549

6H

Nd

1H

B

B

B

436

1H

1_0443

1H

Nd

5H

B

B

AB

435

1H

1_0644

1H

6H

nd

B

B

B

412

1H

1_0075

1H

7H

7H

A

A

B

306

1H

1_1223

1H

5H

nd

B

B

AB

299

1H

1_0148

nd

1H

4H

A

A

AB

252

1H

1_0059

3H

1H

nd

A

A

B

1

nd

1_0828

6H

1H

nd

A

B

A

1

nd

1_0942

nd

4H

1H

B

B

B

1/476

4H

1_0316

1H

7H

7H

B

B

B

1/488

7H

1_1092

5H

1H

5H

B

B

B

1/515

5H

1_1100

nd

2H

1H

B

B

B

1/722

2H

  1. nd – not determined, a1H GenCall score/2H-7H GenCall score, bchromosome location as determined by comparing GenCall scores for 1H and 2H – 7H