From: Microarray analysis of the in vivo sequence preferences of a minor groove binding drug
5-mer | Indirectly Affected | Ratio | 6-mer | Indirectly Affected | Ratio |
---|---|---|---|---|---|
aatct | 9 | 3.3 | cattct | 5 | 20.0 |
aacaa | 16 | 2.7 | ctgaaa | 5 | 10.0 |
caaca | 8 | 2.5 | taagga | 5 | 10.0 |
caata | 8 | 2.3 | aacaac | 5 | 5.0 |
aatac | 8 | 2.1 | acaaca | 5 | 5.0 |
tctct | 9 | 2.1 | tataag | 7 | 3.5 |
acaca | 8 | 2.0 | aaacca | 5 | 3.3 |
tataa | 17 | 2.0 | aataca | 5 | 3.3 |
ataag | 8 | 1.8 | tctttc | 5 | 3.3 |
gaata | 9 | 1.6 | aaacaa | 9 | 3.0 |