Table 1 Studies of growth rate effect on transcriptional response in Saccharomyces cerevisiae
Study | Strain | Cultivation Mode | Limiting Nutrient a | O 2 Availability | D (h -1 ) | Array type |
|---|---|---|---|---|---|---|
Hayes et al. (2002) | FY1679b | Batch/Chemostat | C/N | Aerobic | 0.1–0.2 | Membrane/Glass slide |
Pir et al. (2006) | BY4743c | Chemostat | C/N | Aerobic | 0.1–0.2 | Affymetrix Yeast S98 GeneChip |
Regenberg et al. (2006) | CEN.PK113-7Dd | Chemostat | C | Aerobic | 0.02-0.05-0.1-0.2-0.25-0.33 | Affymetrix Yeast S98 GeneChip |
Castrillo et al. (2007) | FY1679b | Chemostat | C/N/P/S | Aerobic | 0.07-0.1-0.2 | Affymetrix Yeast S98 GeneChip |
Brauer et al. (2008) | DBY10085d DBY9492d DBY9497d | Chemostat | C/N/P/S/U/L | Aerobic | 0.05-0.1-0.15-0.2-0.25-0.3 | Agilent Yeast V2 (Cy3/Cy5) |
This Study | CEN.PK113-7Dd | Chemostat | C/N | Aerobic/Anaerobic | 0.03-0.1-0.2 | Affymetrix Yeast S98 GeneChip |