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Table 1 Gene clusters defined by SOM analysis

From: Selective inhibition of yeast regulons by daunorubicin: A transcriptome-wide analysis

Cluster A

Cluster B

Cluster C

Cluster D

AAH1

GPI12

PPM1

YDR428C

URA2

ACT1

ACC1

RPC31

YBL051C

YMR074C

AAT2

GPM1

PRB1

YDR453C

YJU3

ARG8

ANB1

RPC40

YBL057C

YMR085W

ACO1

GPM2

PRY1

YDR516C

YML056C

ARO4

ARL1

RPG1

YBR012W-B

YMR130W

ADE12

GRE2

PRY3

YDR539W

 

AYR1

BFR1

RPL13B

YCL019W

YMR158C-B

ADE17

GRE3

PSA1

YFR017C

 

CAR2

CAF20

RPL32

YCR082W

YNL054W-B

ADH1

GSF2

PST1

YGL121C

 

CDC91

CBF5

RPL34B

YDL076C

YNL296W

ADH2

GSY2

RAD51

YGL157W

 

DAK1

CCT5

RPL6A

YDL157C

YNR046W

ADH5

GTT1

RHR2

YGP1

 

ERG10

CDC20

RPL6B

YDL166C

YOL026C

ALD4

GYP7

RIB1

YGR045C

 

FAS1

CDC33

RPN10

YDR034C-D

YOL092W

ALD6

HHO1

RIB4

YGR161C

 

GDH1

CDC60

RPO26

YDR060W

YOL124C

AMS1

HMT1

RIP1

YHL021C

 

GLT1

COP1

RPS11B

YDR084C

YOR021C

ARA1

HOR2

RME1

YHM1

 

NUP82

CPR6

RPS19A

YDR098C-B

YOR262W

ARG1

HSP104

RNR1

YHR087W

 

PFK1

DIB1

RPS26A

YDR154C

YOR343C-A

ARG4

HSP12

SCM4

YIL011W

 

PHB1

DPB4

RPS4B

YDR210C-D

YOR343C-B

ARG5

HSP26

SCS7

YIL056W

 

PYC2

DST1

RPS8A

YDR210W-D

YOR382W

ARO3

HSP42

SCW11

YIL077C

 

QCR10

FCY1

RPT3

YDR261C-D

YPL199C

ASH1

HXK1

SDS24

YJL016W

 

QCR2

FKB2

RRP4

YDR261W-B

YPL225W

BAP2

HXK2

SGE1

YJL094C

 

RFC5

FPR1

RRP5

YDR316W-B

YPR137C-B

BAP3

HXT1

SHM2

YJR008W

 

RNR4

FRQ1

RRP9

YDR361C

YPR158W-B

BAT2

HXT2

SNO1

YKL151C

 

STI1

HCH1

RRS1

YDR365W-B

YPS7

CAP2

IDH1

SNQ2

YKR067W

 

STP3

HIR1

RSC6

YDR449C

YPT31

CBP4

IDH2

SNZ1

YLL012W

 

TEF1

HIS7

RVB2

YER007C-A

 

CHA1

ILV5

SPI1

YLR110C

 

TKL1

HRP1

SAS10

YER092W

 

CHS1

INO1

SRL3

YLR111W

 

TSA1

HRR25

SBH1

YER126C

 

CIT1

IPT1

SRY1

YLR122C

 

TTR1

HRT1

SEC21

YER138C

 

CLN2

IRA2

SSA1

YLR231C

 

UGA1

ILS1

SEC65

YER160C

 

COQ1

KNS1

SSA2

YLR331C

 

URA4

IMP4

SEC72

YER183C

 

COS1

LAP4

SSD1

YLR352W

 

YBR070C

KAP123

SER3

YFH1

 

COS7

LSC2

SUN4

YLR414C

 

YDR214W

KRI1

SES1

YFL002W-A

 

COX20

MCR1

TAT2

YLR454W

 

YDR476C

KRR1

SIT1

YFL004W

 

CPA1

MDH1

TDH1

YML128C

 

YER134C

LOS1

SKP1

YGR038C-B

 

CTS1

MDH2

TDH2

YMR090W

 

YER182W

LYS7

SMD3

YGR081C

 

CYC3

MEP1

TDH3

YMR173W-A

 

YGL047W

MGM101

SNF8

YGR161W-B

 

CYT1

MEP3

THO1

YMR181C

 

YGR201C

NAT3

SNT309

YHR052W

 

DDR2

MET6

TIR2

YMR315W

 

YHR049W

NIP7

SPB1

YHR214C-B

 

DDR48

MMD1

TPI1

YNL200C

 

YIL087C

NMD3

SPE3

YHR214C-C

 

DED1

MOG1

TPS2

YNL212W

 

YIR035C

NOP12

SPE4

YIL127C

 

DYN1

MRPL35

TRR2

YOL101C

 

YLL023C

NOP58

SSF1

YJR027W

 

EHT1

MSF1'

TSL1

YOR009W

 

YLR112W

NPI46

SSP120

YJR029W

 

ENO1

MTF2

TUF1

YOR022C

 

YLR356W

NPT1

STS1

YKL014C

 

ENO2

NCE102

UGP1

YOR062C

 

YMR178W

NRD1

SUI1

YKL054C

 

ERG11

NCR1

URA1

YOR081C

 

YNL100W

OLI1

SUI2

YKR081C

 

ERG26

OAC1

UTR2

YOR258W

 

YNL305C

OST3

SXM1

YKT6

 

ERG5

OPI3

VAP1

YOR280C

 

YPL101W

PCL1

TIF11

YLR009W

 

ERG6

PBI2

VID24

YOR289W

 

YPR098C

PFS2

TIF34

YLR035C-A

 

EXG1

PCL7

YAL053W

YOR338W

 

YSA1

PHO11

TIF35

YLR065C

 

FBA1

PDC1

YBL049W

YPL004C

  

PHO12

TIP1

YLR106C

 

FUN14

PDC5

YBL064C

YPL066W

  

PRE10

TPM1

YLR157C-B

 

GCV1

PDH1

YBR006W

YPL134C

  

PRE2

TPM2

YLR159W

 

GCV2

PDR5

YBR053C

YPL156C

  

PRE3

TRP1

YLR221C

 

GCY1

PET8

YBR230C

YPR153W

  

PRE9

UBA1

YLR227W-B

 

GLK1

PEX11

YDC1

YPR172W

  

PUP2

UBC1

YLR410W-B

 

GLO1

PGK1

YDL124W

YRA1

  

RDI1

UBC13

YML039W

 

GLY1

PGM2

YDR041W

YTP1

  

RLP7

UBC4

YML093W

 

GND1

PHO3

YDR233C

ZRT1

  

RNA14

UBC6

YML125C

 

GPA2

PIR1

YDR319C

ZRT2

  

RNH70

URA5

YMR045C

 

GPD2

PLB1

YDR387C

   

RPA49

VAR1

YMR046W-A

 

GPH1

PPA2

YDR391C

   

RPC10

YBL005W-B

YMR050C