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Table 4 SNPs in Citrus clementina BESs identified by PolyBayes

From: Development of genomic resources for Citrus clementina: Characterization of three deep-coverage BAC libraries and analysis of 46,000 BAC end sequences

Summary

 

   N° SNPsa

6617

   P_SNPb

0.984

   Total seq (kb)c

6139

   SNP/kb

1.08

Detailed relation of SNPs

 

   Transitions

3546 (53.59%)

ag

1781

ct

1765

   Transversions

2162 (32.67%)

ac

541

at

713

cg

330

gt

578

   Indels

909 (13.74%)

c-

112

t-

354

g-

108

a-

335

  1. a Number of SNPs with P_SNP > 0,9
  2. b Average PolyBayes score
  3. c Total length of analyzed sequence