From: High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots
Repeat type | IGRs | ORFs | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Motif length | Copy number | Mis-matches allowed | Hot (n = 473) | Non hot (n = 5520) | Hot (n = 297) | Non hot (n = 5683) | ||||
 |  |  | No. of repeats | % of IGRs with a rpt. | No. of repeats | % of IGRs with a rpt. | No. of repeats | % of ORFs with a rpt. | No. of repeats | % of ORFs with a rpt |
1 (A) | 6+ | perfect | 1277 | 83.1 | 12547 | 77.4 | 339 | 57.6 | 13556 | 74.7 |
 |  | e = 10 | 1236 | 82.2 | 12262 | 77.0 | 338 | 57.6 | 13495 | 74.8 |
 |  | e = 6 | 1470 | 85.4 | 15153 | 82.2 | 437 | 64.3 | 17657 | 80.8 |
 | 14+ | perfect | 79 | 15.6 | 409 | 6.99 | 4 | 1.35 | 30 | 0.475 |
 |  | e = 10 | 146 | 27.5 | 741 | 12.2 | 5 | 1.68 | 73 | 1.16 |
 |  | e = 6 | 173 | 31.9 | 917 | 14.7 | 7 | 2.02 | 132 | 2.16 |
1 (G) | 6+ | perfect | 33 | 6.55 | 241 | 4.09 | 32 | 10.4 | 474 | 7.80 |
 |  | e = 10 | 32 | 6.34 | 240 | 4.08 | 32 | 10.4 | 474 | 7.80 |
 |  | e = 6 | 46 | 8.67 | 307 | 5.16 | 44 | 13.8 | 641 | 10.3 |
 | 14+ | perfect | 2 | 0.423 | 2 | 0.0362 | 0 | 0 | 0 | 0 |
 |  | e = 10 | 2 | 0.423 | 2 | 0.0362 | 0 | 0 | 0 | 0 |
 |  | e = 6 | 2 | 0.423 | 2 | 0.0362 | 0 | 0 | 0 | 0 |
2 | 6+ | perfect | 57 | 10.4 | 357 | 6.05 | 8 | 2.36 | 21 | 0.352 |
 |  | e = 10 | 100 | 18.7 | 668 | 11.1 | 15 | 4.38 | 137 | 2.32 |
 |  | e = 6 | 130 | 23.5 | 1016 | 16.3 | 24 | 7.07 | 246 | 4.12 |
 | 10+ | perfect | 19 | 3.81 | 117 | 2.08 | 3 | 1.01 | 6 | 0.106 |
 |  | e = 10 | 28 | 5.71 | 171 | 3.04 | 5 | 1.68 | 12 | 0.211 |
 |  | e = 6 | 33 | 6.77 | 213 | 3.77 | 5 | 1.68 | 16 | 0.282 |
3 | 6+ | perfect | 7 | 1.27 | 27 | 0.435 | 8 | 2.36 | 165 | 2.46 |
 |  | e = 10 | 11 | 2.11 | 66 | 1.12 | 20 | 5.39 | 316 | 4.43 |
 |  | e = 6 | 21 | 4.02 | 118 | 1.96 | 28 | 7.74 | 478 | 6.49 |
 | 10+ | perfect | 1 | 0.211 | 8 | 0.145 | 0 | 0 | 29 | 0.493 |
 |  | e = 10 | 3 | 0.634 | 17 | 0.308 | 0 | 0 | 64 | 1.09 |
 |  | e = 6 | 3 | 0.634 | 20 | 0.362 | 0 | 0 | 100 | 1.57 |
4 | 6+ | perfect | 0 | 0 | 5 | 0.0906 | 0 | 0 | 1 | 0.0176 |
 |  | e = 10 | 0 | 0 | 12 | 0.217 | 0 | 0 | 1 | 0.0176 |
 |  | e = 6 | 0 | 0 | 19 | 0.344 | 0 | 0 | 2 | 0.0352 |
 | 10+ | perfect | 0 | 0 | 1 | 0.0181 | 0 | 0 | 0 | 0 |
 |  | e = 10 | 0 | 0 | 1 | 0.0181 | 0 | 0 | 0 | 0 |
 |  | e = 6 | 0 | 0 | 1 | 0.0181 | 0 | 0 | 0 | 0 |
5 | 6+ | perfect | 0 | 0 | 2 | 0.0362 | 0 | 0 | 0 | 0 |
 |  | e = 10 | 1 | 0.211 | 4 | 0.0725 | 0 | 0 | 3 | 0.0528 |
 |  | e = 6 | 1 | 0.211 | 5 | 0.0906 | 0 | 0 | 4 | 0.0704 |
 | 10+ | perfect | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
 |  | e = 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
 |  | e = 6 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0.0176 |
6 | 6+ | perfect | 1 | 0.211 | 3 | 0.0543 | 0 | 0 | 3 | 0.0528 |
 |  | e = 10 | 1 | 0.211 | 21 | 0.326 | 2 | 0.673 | 15 | 0.246 |
 |  | e = 6 | 1 | 0.211 | 10 | 0.181 | 4 | 1.35 | 11 | 0.176 |
 | 10+ | perfect | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
 |  | e = 10 | 0 | 0 | 9 | 0.145 | 1 | 0.337 | 1 | 0.0176 |
 |  | e = 6 | 0 | 0 | 4 | 0.0725 | 1 | 0.337 | 5 | 0.0704 |