From: High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots
Repeat type | IGRs | ORFs | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Motif length | Copy number | Mis-matches allowed | Mean per kb freq. | Freq. ratio (hot/non hot) | P value | Mean per kb freq. | Freq. ratio (hot/non hot) | P value | ||
 |  |  | Hot | Non hot |  |  | Hot | Non hot |  |  |
1 (A) | 3 to 5 | perfect | 35.0 | 39.9 | 0.88 | < 0.0001 | 29.2 | 36.1 | 0.81 | < 0.0001 |
 |  | e = 10 | 34.3 | 39.4 | 0.87 | < 0.0001 | 29.1 | 36.0 | 0.81 | < 0.0001 |
 |  | e = 6 | 31.8 | 36.7 | 0.87 | < 0.0001 | 28.0 | 34.7 | 0.81 | < 0.0001 |
 | 6+ | perfect | 5.42 | 4.61 | 1.17 | < 0.0001 | 0.981 | 1.64 | 0.60 | < 0.0001 |
 |  | e = 10 | 5.24 | 4.50 | 1.16 | < 0.0001 | 0.978 | 1.64 | 0.60 | < 0.0001 |
 |  | e = 6 | 6.12 | 5.53 | 1.11 | 0.00173 | 1.28 | 2.13 | 0.60 | < 0.0001 |
 | 14+ | perfect | 0.418 | 0.171 | 2.45 | < 0.0001 | 0.0134 | 0.00733 | 1.83 | n/s |
 |  | e = 10 | 0.733 | 0.311 | 2.36 | < 0.0001 | 0.0182 | 0.0166 | 1.10 | n/s |
 |  | e = 6 | 0.854 | 0.377 | 2.26 | < 0.0001 | 0.0218 | 0.0271 | 0.80 | n/s |
1 (G) | 3 to 5 | perfect | 9.18 | 7.25 | 1.27 | < 0.0001 | 12.9 | 10.1 | 1.28 | < 0.0001 |
 |  | e = 10 | 9.16 | 7.24 | 1.27 | < 0.0001 | 12.9 | 10.1 | 1.28 | < 0.0001 |
 |  | e = 6 | 8.89 | 7.13 | 1.25 | < 0.0001 | 12.6 | 9.93 | 1.27 | < 0.0001 |
 | 6+ | e = 6 | 0.160 | 0.0931 | 1.72 | 0.00124 | 0.135 | 0.0798 | 1.69 | n/s |
 | 14+ | perfect | 0.0035 | 0.000725 | 4.83 | 0.00179 | 0 | 0 | n/a | n/a |
 |  | e = 10 | 0.0035 | 0.000725 | 4.83 | 0.00179 | 0 | 0 | n/a | n/a |
 |  | e = 6 | 0.0035 | 0.000725 | 4.83 | 0.00179 | 0 | 0 | n/a | n/a |
2 | 3 to 5 | perfect | 4.67 | 3.96 | 1.18 | < 0.0001 | 1.82 | 1.74 | 1.05 | n/s |
 |  | e = 10 | 4.34 | 3.68 | 1.18 | 0.000266 | 1.78 | 1.71 | 1.04 | n/s |
 |  | e = 6 | 6.17 | 5.52 | 1.12 | 0.000234 | 3.18 | 3.14 | 1.01 | n/s |
 | 6+ | perfect | 0.368 | 0.196 | 1.88 | 0.000248 | 0.0405 | 0.00572 | 7.09 | n/s |
 |  | e = 10 | 0.599 | 0.356 | 1.68 | < 0.0001 | 0.0720 | 0.0229 | 3.14 | n/s |
 |  | e = 6 | 0.797 | 0.529 | 1.51 | < 0.0001 | 0.109 | 0.0398 | 2.73 | n/s |
 | 10+ | perfect | 0.158 | 0.0606 | 2.62 | n/s | 0.0163 | 0.00173 | 9.44 | < 0.0001 |
 |  | e = 10 | 0.221 | 0.0931 | 2.38 | 0.00164 | 0.0207 | 0.00275 | 7.53 | < 0.0001 |
 |  | e = 6 | 0.252 | 0.109 | 2.32 | 0.00132 | 0.0159 | 0.00584 | 2.72 | < 0.0001 |
6 | 6+ | e = 6 | 0.00552 | 0.00341 | 1.62 | n/s | 0.0135 | 0.000877 | 15.40 | < 0.0001 |