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Table 2 List and characteristics of the fungal genomes belonging to the subphyla Saccharomycotina and Taphrinomycotina archived in SNUGB.

From: SNUGB: a versatile genome browser supporting comparative and functional fungal genomics

Speciesa

Size (Mb)

# of ORFs

# of Exons

Cb

Ib

Eb

Source

Refs

Fungi (Kingdom)e

        

   Ascomycota (Phylum)

        

Saccharomycotina (Subphylum)

        

Candida albicans SC5314

14.3

6,090

6,624

N

Y

N

SGTC

[56, 57]

Candida albicans WO-1

14.4

6,160

6,395

N

Y

N

BI

N

Candida dubliniensis d

14.5

6,027

N

N

N

N

SI

N

Candida glabrata CBS138

12.3

5,165

5,249

N

Y

N

CBS

[58]

A: Candida guilliermondii T: Pichia guilliermondii

10.6

5,920

5,935

N

Y

N

BI

N

Candida lusitaniae

12.1

5,941

5,956

N

Y

N

BI

N

Candida parapsilosis

13.1

5,733

5,733

N

Y

N

BI

N

Candida tropicalis

14.7

6,258

6,292

N

Y

N

BI

N

Candida tropicalis f

2.1

N

N

N

N

N

GS

[59]

Ashbya gossypii

8.8

4,717

4,943

7

Y

N

NCBI

[60]

Debaryomyces hansenii

12.2

6,354

6,710

7

Y

N

CBS

[58]

Debaryomyces hansenii f

2.3

N

N

N

N

N

GS

[61]

A: Candida sphaerica T: Kluyveromyces lactis

10.7

5,327

5,457

N

Y

N

GS

[58]

A: Candida sphaerica T: Kluyveromyces lactisf

5.1

N

N

N

N

N

GS

[62]

A: Candida kefyr T:Kluyveromyces marxianusf

2.0

N

N

N

N

N

GS

[63]

Kluyveromyces polysporus DSM70294

14.7

5,367

5,524

N

Y

N

SIG

[64]

Kluyveromyces thermotolerans f

2.2

N

N

N

N

N

GS

[65]

Kluyveromyces waltii

10.9

4,935

5,395

N

Y

N

BI

[66]

Lodderomyces elongisporus

15.5

5,802

5,856

N

Y

N

BI

N

Saccharomyces bayanus MCYC 623

11.5

9,385

9,385

N

Y

N

BI

[13]

Saccharomyces bayanus 623-6C YM4911

11.9

4,966

4,966

N

Y

N

WGSC

[12]

Saccharomyces bayanus var. uvarumf

4.5

N

N

N

N

N

GS

[67]

Saccharomyces castellii

11.4

4,677

4,677

N

Y

N

WGSC

[12]

A: Candida robusta S288C T: Saccharomyces cerevisiae S288C

12.2

6,692

7,042

16

Y

N

SGD

[68]

A: Candida robusta RM11-1a T: Saccharomyces cerevisiae RM11-1a

11.7

5,696

5,988

N

Y

N

BI

N

A: Candida robusta YJM789 T: Saccharomyces cerevisiae YJM789

12.0

5,903

6,153

N

Y

N

SI

[69]

Saccharomyces exiguus f

2.0

N

N

N

N

N

GS

[70]

Saccharomyces kluyveri

11.0

2,968

2,968

N

Y

N

WGSC

[12]

Saccharomyces kluyveri f

2.2

N

N

N

N

N

GS

[71]

Saccharomyces kudriavzevii

11.2

3,768

3,768

N

Y

N

WGSC

[12]

Saccharomyces mikatae

11.5

9,016

9,016

N

Y

N

BI

[13]

Saccharomyces mikatae

10.8

3,100

3,100

N

Y

N

WGSC

[12]

Saccharomyces paradoxus

11.9

8,939

8,939

N

Y

N

BI

[13]

Saccharomyces servazzii f

2.0

N

N

N

N

N

GS

[72]

Pichia angusta f

4.5

N

N

N

N

N

GS

[73]

Pichia stipitis

15.4

5,839

8,428

N

Y

N

JGI

[74]

Pichia sorbitophila f

3.8

N

N

N

N

N

GS

[75]

A: Candida lipolytica T: Yarrowia lipolytica

20.5

6,524

7,264

6

Y

N

CBS

[58]

A: Candida lipolytica T: Yarrowia lipolyticaf

4.6

N

N

N

N

N

GS

[76]

Zygosaccharomyces rouxii f

4.1

N

N

N

N

N

GS

[77]

Taphrinomycotina (Subphylum)

        

Pneumocystis carinii c, d

6.3

4,020

N

N

N

N

SI

N

Schizosaccharomyces japonicus

11.3

5,172

10,321

N

Y

N

BI

N

Schizosaccharomyces pombe

12.6

5,058

9,869

3

Y

N

GDB

[78]

Schizosaccharomyces octosporus

11.2

4,925

10,168

N

N

N

BI

N

Total

424.6

176,444

188,121

5

28

0

  
  1. aA indicates anamorph name and T presents teleomorph name of fungi.
  2. bC means chromosomes, I indicates InterPro, and E presents EST.
  3. cIncomplete coverage of genome information
  4. dInsufficient exon/intron information
  5. eTaxonomy based on [28]
  6. fSequences from Random Sequence Tag (RST)
  7. 'Y' indicates the existence of information in each field, and 'N' indicates the lack of information.