From: Genome wide survey, discovery and evolution of repetitive elements in three Entamoeba species
name | completea | incompletea | coverage (bp) | coverage (%)b |
---|---|---|---|---|
Eh_LINE1 | 88 | 654 | 1079630 | 5.2% |
Eh_LINE2 | 73 | 442 | 759971 | 3.7% |
Eh_LINE3 | 10 | 87 | 160940 | 0.8% |
Eh_SINE1 | 264 | 181 | 187972 | 0.9% |
Eh_SINE2 | 94 | 162 | 108195 | 0.5% |
Eh_SINE3 | 9 | 40 | 18851 | 0.1% |
Eh_ERE1 | 0 | 777 | 1014754 | 4.9% |
Eh_ERE2 | 71 | 728 | 733987 | 3.5% |
Eh_MuDR | 0 | 4 | 2851 | < 0.1% |
Eh_mariner | 0 | 1 | 1008 | < 0.1% |
Eh_TOTAL | 609 | 3047 | 4068159 | 19.7% |
Ed_LINE1 | 63 | 510 | 839108 | 3.7% |
Ed_LINE2 | 28 | 449 | 506244 | 2.2% |
Ed_LINE3 | 2 | 42 | 46734 | 0.2% |
Ed_SINE1 | 282 | 143 | 208941 | 0.9% |
Ed_SINE2 | 53 | 136 | 73091 | 0.3% |
Ed_SINE3 | 2 | 16 | 2497 | < 0.1% |
Ed_ERE1 | 51 | 536 | 526451 | 2.3% |
Ed_MuDR | 0 | 4 | 2075 | < 0.1% |
Ed_mariner | 0 | 1 | 1011 | < 0.1% |
Ed_TOTAL | 481 | 1837 | 2206152 | 9.7% |
Ei_LINE | 2 | 67 | 59,308 | 0.1% |
Ei_ERE1 | 30 | 227 | 170,510 | 0.4% |
Ei_DDE | 328 | 2607 | 1,678,976 | 4.1% |
Ei_mariner | 390 | 1400 | 822,878 | 2.0% |
Ei_hAT | 35 | 755 | 464,161 | 1.1% |
Ei_MuDR | 49 | 831 | 522,116 | 1.3% |
Ei_Polinton | 5 | 126 | 336,005 | 0.8% |
Ei_piggyBac | 14 | 32 | 27,894 | 0.1% |
Ei_TOTAL | 677 | 6082 | 4033163 | 9.9% |