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Table 2 Compound microsatellite complexity in the whole genome and in the cds.

From: Survey of microsatellite clustering in eight fully sequenced species sheds light on the origin of compound microsatellites

 

whole genome

cds

c.c.:1

2

3

4

5

6

7

8

≥ 9

2

3

4

≥ 5

H. sap.

51 997

6 096

1 198

335

106

41

7

12

81

21

2

0

M. mul.

52 796

6 565

1 389

433

155

49

10

10

53

11

0

0

M. mus.

137 237

26 551

6 561

2 080

652

241

99

114

84

10

1

0

R. nor.

113 077

16 505

2 632

607

170

78

19

32

72

11

5

4

O. anat.

1 791

105

13

4

0

0

0

0

14

2

0

0

G. gal.

7 782

610

115

17

6

2

0

0

32

3

1

0

D. rerio

71 280

15 703

4 163

1 641

592

336

143

301

78

8

0

0

D. mel.

685

29

0

0

0

0

0

0

102

3

0

0

  1. 1compound microsatellite complexity
  2. Complexity refers to the number of individual microsatellites constituting the compound microsatellite. All values are in counts
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BMC Genomics

ISSN: 1471-2164

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