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Table 1 Microsatellite loci motif and in situ localization to polytene chromosomes

From: Isolation and characterization of microsatellite markers from the olive fly, Bactrocera oleae, and their cross-species amplification in the Tephritidae family

 

Accession number

Locus name

Motif

Map position

T (°C)

1

EU489746

Boms1

(GT)13

-

 

2

AF467831

Boms2

(CA)8TA(CA)3

4 (IL)

58

3

EU489747

Boms3

(GT)14

(CAA)3CAG(CAA)3

no specific signal

 

4

EU489748

Boms4

(GT)15GC(GT)3GC(GT)13GA(GT)4

-

 

5

EU489749

Boms5

(CA)10TA(CA)2

95 (VR)

 

6

EU489750

Boms6

(CA)9

(GT)3GG(GT)11TT(GT)2

-

 

7

EU489751

Boms7

(CA)7CC(CA)3

-

 

8

EU489752

Boms8

(CA)7CG(CA)5

-

 

9

EU489753

Boms9

(GT)10CTGA(GT)3

-

 

10

AF467830

Boms10

(CA)10GA(CA)2

no specific signal

55–62

11

AF467832

Boms11 (Bo-D37)

(CA)7CG(CA)3

-

 

12

EU489754

Boms12

(CA)10AACA

26 (IIL)

58

13

EU489755

Boms13

GTGA(GT)10

-

 

14

EU489756

Boms14

(AT)2GT(AT)11

-

 

15

EU489757

Boms15

(GT)11GA(GT)2

no specific signal

55–62

16

AF467829

Boms16 (Bo-D46)

(CA)10

42(IIR)

58

17

EU489758

Boms17

(TG)13

44(IIR)

58

18

AF467828

Boms18

(CA)13

-

 

19

EU489759

Boms19

CAAA(CA)10

-

 

20

EU489760

Boms20

(GT)13+

8(IL) 2 signals

58

21

AF467827

Boms21

GTGG(GT)13ATGT

73(IVL)

58

22

DQ078248

Boms22

CAT(CA)7(TA)3TT(TA)5

5(IL)

58

23

EU489761

Boms23

(CA)12

3(IL)

58

24

EU489762

Boms24

(GT)12

64(IIIR)

58

25

AF467826

Boms25

(GT)12

30(IIL), 97&100(VR)

58/62

26

EU489763

Boms26

(GT)8AT(GT)2

26(IIL)

58

27

AF467825

Boms27 (Bo-D52)

(GA)14

83(IVR)

58

28

EU489764

Boms28

(CA)12CT(CA)5 (GA)12GG(GA)11

-

 

29

AF467824

Boms29

(GT)10

-

 

30

AF467823

Boms30

(GT)17

5–6(IL)

58

31

DQ078249

Boms31

(GT)4GC(GT)6GC(GT)2

63&65(IIIR)

58,62

32

EU489765

Boms32

(CA)14

-

 

33

EU489766

Boms33

(CA)2TA(CA)9

no signal

55–58

34

EU489767

Boms34

(CA)3CTA(CA)8

86(IVR)

58

35

EU489768

Boms35

(CA)48

-

 

36

EU489769

Boms36

(CA)24

-

 

37

EU489770

Boms37

(TG)4G(TG)3

-

 

38

EU489771

Boms38

(GT)10AT(GT)6

-

 

39

EU489772

Boms41

GTAT(GT)8GCGTGA(GT)4

-

 

40

EU489773

Boms42

(AT)3CC(GT)3(AT)3(GT)14GAGT

-

 

41

EU489774

Boms43

(CA)18C(CA)3

-

 

42

EU489775

Boms45

TAA(CAA)6

-

 

43

EU489776

Boms47

(AG)12TG(AG)8(TG)3(AG)10

-

 

44

EU489777

Boms48

(TC)5C8G(CT)4C5G(CT)5C5G(CT)6CCTCG(CT)8

-

 

45

EU489778

Boms49

(CA)3CT(CA)3CT(CA)3CT(CA)9

-

 

46

EU489779

Boms50

(GA)18N4(GA)2G4(GA)2G4(GA)14CA(GA)2TA(GA)5

-

 

47

EU489780

Boms53

T8GT10GT7CGT9GT6

-

 

48

EU489781

Boms55

(AG)13GG(AG)3GC(AG)8

-

 

49

EU489782

Boms58

A6CA3GCA6TA5CA5

-

 

50

DQ078250

Boms59

TGTA(TG)10

-

 

51

DQ078251

Boms60

(CAAA)2

A6CA3GCA6TA5CA4N26A2GA9CGA4

-

 

52

DQ078252

Boms61

T23G2T3GT3GT2GTAAT4C2T5CTGT5

-

 

53

EU489783

Boms62

A11CA11CATCACA4GA2GA8

-

 

54

EU489784

Boms63

A3CA3CCA18

-

 

55

EU489785

Boms64

CAGA(CA)2C(CA)4N12(CA)4C(CA)2

(CA)5C(CA)4C(CA)4ACACC(CA)3C(CA)3

-

 

56

EU489786

Boms68

T8

-

 

57

EU489787

Boms69

(A/G TT)4N4T7(CTT)2AGT4CA2T4GT4

-

 

58

EU489788

Boms70

(GT)-rich

-

 
  1. Boms1–34: Microsatellite loci isolated from total, small-insert DNA libraries
  2. Boms35–70: Microsatellite loci isolated from enriched libraries
  3. T: annealing temperature for in situ hybridization
  4. (-): not tested
  5. N: bases that do not present any motif