Skip to main content
Figure 3 | BMC Genomics

Figure 3

From: Transcriptomic dissection of tongue squamous cell carcinoma

Figure 3

Expression values of the genes constitute of the altered biological processes in OTSCC. The altered biological processes in OTSCC were identified by Gene Ontology analysis (Table 2) as described in the Materials and Methods section. The expression values of the genes consisting of the altered biological processes were extracted from the RMA based expression index, and individual heat maps were generated for the identified altered biological processes in OTSCC. To removed the effect of baseline and scale in the color image, the data from every transcript was standardized (remove mean, divide by standard deviation) before plotting. To increase the contrast, values lower than the 10th percentile were replaced with the 10th percentile, and values higher than the 95th percentile were replaced with the 95th percentile.

Back to article page