From: Improving the specificity of exon prediction using comparative genomics
clearly orthologous exons (TP) | potential non-exons (FP) | potential non-genes (FP) | RefSeq exons (TP) | RefSeq genes (TP) | |
---|---|---|---|---|---|
size | 76,229 (1.2 × 107 bps) | 1,518,082 (8.3 × 108 bps) | -- | 172,042 (2.9 × 107) | 20,193 |
GENSCAN | -- | -- | -- | 117,860 | 3,497 |
TWINSCAN | -- | -- | -- | 118,650 | 5,131 |
GENSCAN (w/mouse) | 53,217 | 54,360 | 4,856 | 115,551 | 3,284 |
TWINSCAN (w/mouse) | 54,879 | 12,276 | 1,172 | 117,100 | 4,944 |
GENSCAN (w/dog) | 52,712 | 49,899 | -- | -- | -- |
TWINSCAN (w/dog) | 54,257 | 11,095 | -- | -- | -- |