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Table 1 GEC scores and predicted function levels (TF) of top 7 selected position weight matrices

From: Transcription factor and microRNA regulation in androgen-dependent and -independent prostate cancer cells

Index

ID

Name

PWM Description

GEC

TF

1

M00199↓

AP-1

AP-1 binding site

0.0886

-7.61E+05

2

M00225↓

STAT3

signal transducer and activator of transcription 3

0.0885

-6.48E+05

3

M00926↓

AP-1

AP-1 binding site

0.0878

-1.35E+06

4

M00495

Bach1

BTB and CNC homolog 1

0.0870

-5.91E+05

5

M00925↓

AP-1

AP-1 binding site

0.0870

-1.97E+05

6

M00982

KROX

early growth response

0.0860

-6.86E+05

7

M00624↓

DBP

albumin D-box

0.0857

-6.47E+05

  1. ↓: the expression level of the transcription factor binding to the predicted binding site is down-regulated in expression array.