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Table 1 Description of bin distributions in the MapMan platform.

From: In silico comparison of transcript abundances during Arabidopsis thaliana and Glycine max resistance to Fusarium virguliforme

Bin

Name

Elements

p-value

1.1

PS.lightreaction

59

0.04

1.1.4

PS.lightreaction.ATP synthase

6

0.01

 

TCA/org. transformation.other organic acid

  

8.2.11

transformaitons.atp-citrate lyase

2

0.03

10.2

cell wall.cellulose synthesis

14

0.01

 

lipid metabolism.FA synthesis and FA elongation.long

  

11.1.9

chain fatty acid CoA ligase

5

0.004

12

N-metabolism

13

0.03

12.2

N-metabolism.ammonia metabolism

8

0.04

 

amino acid metabolism.synthesis.aspartate

  

13.1.3.4

family.methionine

9

0.046

16.1.4

secondary metabolism.isoprenoids.carotenoids

6

0.04

 

secondary metabolism.phenylpropanoids.lignin

  

16.2.1

biosynthesis

18

0.006

16.7

secondary metabolism.wax

4

0.027

16.8.2

secondary metabolism.flavonoids.chalcones

3

0.006

 

hormone metabolism.brassinosteroid.synthesis-

  

17.3.1.1.1

degradation.BRs.DET2

3

0.02

19.1

tetrapyrrole synthesis.magnesium chelatase

2

0.03

26.3

misc.gluco-, galacto- and mannosidases

22

0.01

27.1

RNA.processing

71

0.01

 

RNA.regulation of transcription.TCP transcription factor

  

27.3.29

family

6

0.04

29.1

protein.aa activation

32

0.02

29.2

protein.synthesis

200

0.004

 

protein.synthesis.chloroplast/mito – plastid ribosomal

  

29.2.1

protein

36

0.007

 

protein.synthesis.chloroplast/mito – plastid ribosomal

  

29.2.1.1

protein.plastid

21

0.04

29.2.2

protein.synthesis.misc ribososomal protein

106

0.01

29.4

protein.postranslational modification

186

0.03

 

protein.postranslational modification.kinase.receptor like

  

29.4.1.51

cytoplasmatic kinase I

2

0.03

29.5.11.4.3.2

protein.degradation.ubiquitin.E3.SCF.FBOX

58

0.01

29.6

protein.folding

25

0.006

30

signalling

267

0.02

30.3

signalling.calcium

59

0.01

35

not assigned

2150

0.02

35.2

not assigned.unknown

1191

0.003

  1. The bin number of the microarray was also denoted from 1–100 and it was only shown for the bins with significant changes in transcript abundance at P < 0.05.