From: RNA-Seq analysis and transcriptome assembly for blackberry (Rubus sp. Var. Lochness) fruit
Samples | Total raw reads | Total clean reads | Total clean nucleotides (nt) | Q20 percentage | GC percentage | Type of gene detected | Total number | Total length (nt) | Mean length (nt) | N50 |
---|---|---|---|---|---|---|---|---|---|---|
RF1 | 48 335 970 | 44 166 280 | 4 416 628 000 | 96,59% | 45,65% | Raw sequences | 68 768 | 32 762 368 | 476 | 1284 |
Consensus sequences | 41 770 | 37 272 781 | 892 | 1627 | ||||||
RF2 | 49 872 928 | 45 562 458 | 4 556 245 800 | 96,55% | 45,91% | Raw sequences | 68 357 | 33 018 028 | 483 | 1289 |
Consensus sequences | 41 881 | 37 472 313 | 895 | 1611 |