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Table 2 Unigenes annotated in different databases

From: The developmental transcriptome of the synanthropic fly Chrysomya megacephala and insights into olfactory proteins

 

CE

CL

CA

CE-specific

CL-specific

CA-specific

Common

CE-CL-CA combined

 

NO.

PCT (%)

NO.

PCT (%)

NO.

PCT (%)

NO.

PCT (%)

NO.

PCT (%)

NO.

PCT (%)

NO.

PCT (%)

NO.

PCT (%)

NR

11155

50.05

10610

61.76

11123

58.75

770

13.99

485

28.35

862

31.68

9123

71.22

13797

38.43

NT

2774

12.45

2589

15.07

2693

14.22

111

2.02

52

3.04

63

2.32

2432

18.99

3035

8.45

KO

2956

13.26

2877

16.75

3003

15.86

116

2.11

79

4.62

142

5.22

2625

20.49

3418

9.52

Swissprot

8682

38.96

8441

49.13

8695

45.92

422

7.67

292

17.07

452

16.61

7044

54.99

10097

28.12

PFAM

9231

41.42

8732

50.83

9141

48.28

685

12.44

376

21.98

660

24.26

7565

59.06

11401

31.75

GO

9854

44.22

9281

54.02

9754

51.52

766

13.91

422

24.66

616

22.64

5013

39.14

12196

33.97

KOG

6759

30.33

6542

38.08

6789

35.86

242

4.40

154

9.00

288

10.58

6007

46.90

7588

21.13

Total NO.

22286

 

17180

 

18934

 

5505

 

1711

 

2721

 

12809

 

35900

 
  1. Abbreviations: CE: Unigenes of Chrysomya megacephala eggs; CL: Unigenes of C. megacephala larvae; CA: Unigenes of C. megacephala adults; CE-specific: Specific unigenes of C. megacephala eggs; CL-specific: Specific unigenes of C. megacephala larvae; CA-specific: Specific unigenes of C. megacephala adults; Common: Common unigenes of C. megacephala eggs, larvae and adults; CE-CL-CA Combined: Total unigenes of C. megacephala eggs, larvae and adults.
  2. NO.: number; PCT (%): percentage (%); NR: NCBI non-redundant protein sequences; NT: NCBI non-redundant nucleotide sequences; KO: KEGG Orthology; Swissprot: A manually annotated and reviewed protein sequence database; PFAM: Protein family; GO: Gene Ontology; KOG: Clusters of Orthologous Groups of proteins; Total NO.: Total number of annotated unigenes.