Sample | Raw reads | High quality reads | Mapping to genome | ||
---|---|---|---|---|---|
Number | % | Number | % | ||
SC1 | 110,445,132 | 102,110,944 | 92.45 | 81,760,543 | 80.07 |
SC2 | 118,361,874 | 109,714,376 | 92.69 | 87,250,440 | 79.53 |
SC3 | 108,124,090 | 99,783,462 | 92.29 | 79,232,619 | 79.4 |
ST1 | 122,256,502 | 114,109,402 | 93.34 | 88,945,294 | 77.95 |
ST2 | 109,367,326 | 102,743,400 | 93.94 | 80,030,194 | 77.89 |
ST3 | 106,564,594 | 99,517,680 | 93.39 | 77,090,356 | 77.46 |
TC1 | 108,790,978 | 102,039,304 | 93.79 | 79,933,511 | 78.34 |
TC2 | 105,514,112 | 99,385,790 | 94.19 | 80,911,686 | 81.41 |
TC3 | 102,595,286 | 96,561,142 | 94.12 | 76,501,404 | 79.23 |
TT1 | 117,028,020 | 108,822,936 | 92.99 | 84,948,725 | 78.06 |
TT2 | 117,708,038 | 109,660,302 | 93.16 | 85,938,332 | 78.37 |
TT3 | 114,845,464 | 106,774,882 | 92.97 | 83,835,866 | 78.52 |
Total | 1,341,601,416 | 1,251,223,620 | 93.26 | 986,378,970 | 78.83 |