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Table 1 General information of sequencing reads and reads that mapped to the reference genome

From: Transcriptome changes in rice (Oryza sativa L.) in response to high night temperature stress at the early milky stage

Sample

Raw reads

High quality reads

Mapping to genome

Number

%

Number

%

SC1

110,445,132

102,110,944

92.45

81,760,543

80.07

SC2

118,361,874

109,714,376

92.69

87,250,440

79.53

SC3

108,124,090

99,783,462

92.29

79,232,619

79.4

ST1

122,256,502

114,109,402

93.34

88,945,294

77.95

ST2

109,367,326

102,743,400

93.94

80,030,194

77.89

ST3

106,564,594

99,517,680

93.39

77,090,356

77.46

TC1

108,790,978

102,039,304

93.79

79,933,511

78.34

TC2

105,514,112

99,385,790

94.19

80,911,686

81.41

TC3

102,595,286

96,561,142

94.12

76,501,404

79.23

TT1

117,028,020

108,822,936

92.99

84,948,725

78.06

TT2

117,708,038

109,660,302

93.16

85,938,332

78.37

TT3

114,845,464

106,774,882

92.97

83,835,866

78.52

Total

1,341,601,416

1,251,223,620

93.26

986,378,970

78.83

  1. “ST”, “SC”, “TT” and “TC” indicate the treatment and control of the heat-sensitive and -tolerant lines, respectively; “1”, “2” and “3” indicate three biological replicates.