Transcriptome changes in rice (Oryza sativa L.) in response to high night temperature stress at the early milky stage

Table 2 Overview of reads that mapped to the genic and intergenic regions

Sample	Total MP	Exon	%	Intron	%	InterGenic	%	Spliced	%
SC1	120,604,217	92,309,005	76.54	860,430	0.71	4,794,472	3.98	22,640,310	18.77
SC2	120,489,277	84,173,841	69.86	1,248,829	1.04	5,752,705	4.77	29,313,902	24.33
SC3	115,039,494	83,651,248	72.72	1,110,422	0.97	7,031,767	6.11	23,246,057	20.21
ST1	191,954,792	131,590,789	68.55	1,479,338	0.77	21,420,452	11.16	37,464,213	19.52
ST2	121,649,971	84,829,641	69.73	1,075,848	0.88	11,366,864	9.34	24,377,618	20.04
ST3	112,121,097	76,909,155	68.59	1,401,805	1.25	9,872,787	8.81	23,937,350	21.35
TC1	124,254,032	84,405,467	67.93	1,029,079	0.83	14,506,377	11.67	24,313,109	19.57
TC2	110,100,967	85,954,481	78.07	510,469	0.46	4,602,925	4.18	19,033,092	17.29
TC3	105,698,981	73,161,750	69.22	1,069,136	1.01	6,573,728	6.22	24,894,367	23.55
TT1	113,772,045	76,581,286	67.31	1,747,207	1.54	6,621,542	5.82	28,822,010	25.33
TT2	147,430,188	100,277,333	68.02	1,518,413	1.03	15,045,184	10.2	30,589,258	20.75
TT3	110,358,555	75,782,160	68.67	1,472,869	1.33	6,061,655	5.49	27,041,871	24.5
Total	1,493,473,616	1,049,626,156	70.28	14,523,845	0.97	113,650,458	7.61	315,673,157	21.14

“ST”, “SC”, “TT” and “TC” indicate the treatment and control of the heat-sensitive and -tolerant lines, respectively; “1”, “2” and “3” indicate three biological replicates.

ISSN: 1471-2164