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Table 2 Functional categorization of up- and down-regulated genes after treatments with SA and CHI

From: Transcriptional profile of sweet orange in response to chitosan and salicylic acid

Categories*

Name

Number of transcripts

UP SA

DOWN SA

UP CHI

DOWN CHI

Biological process

Metabolic process

179

122

81

221

Cellular process

161

137

79

229

Response to stimulus

68

59

20

70

Biological regulation

47

49

28

93

Localization

42

30

16

47

Multicellular organismal process

25

20

8

44

Developmental process

23

22

8

44

Multi-organism process

17

7

4

13

Cellular component organization

15

16

8

25

Signaling

9

17

10

18

Total annotations

586

479

262

804

Cellular component

Cell

196

142

102

283

Organelle

140

98

73

197

Macromolecular complex

42

12

22

40

Membrane-enclosed lumen

9

4

4

11

Extracellular region

8

3

3

4

Total annotations

395

259

204

535

Molecular function

Binding

157

140

77

281

Catalytic activity

149

123

74

217

Transporter activity

25

25

7

33

Electron carrier activity

15

3

15

5

Structural molecule activity

14

2

7

4

Molecular transducer activity

11

9

7

17

Enzyme regulator activity

8

6

3

2

Antioxidant activity

5

0

2

3

Transcription regulator activity

1

5

6

23

Total annotations

385

313

198

585

  1. *Individual gene products may be assigned to more than one functional category.