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Table 3 Goat miRNA in milk bovine QTL

From: Annotation of the goat genome using next generation sequencing of microRNA expressed by the lactating mammary gland: comparison of three approaches

 

Associated with production

Associated with components

Associated with health

Milk yield

Milk fat

Milk protein

Milk cells

 

Milk fat percentage and content

Milk fat yield

Milk protein percentage and content

Milk protein yield

Somatic cell score

BTA2

     

mir-26b

BTA 3

mir-186

mir-190b, mir-186

mir-190b, mir-186, mir-101-1

mir-190b,, mir-186, mir-101-1

mir-190b, mir-186

mir-190b,

BTA 4

mir-129-1

mir-490, mir-671, mir-196b, mir-148a, mir-335

  

mir-671, mir-148a, mir-196b

mir-671

BTA 5

mir-33a, let-7a-3, let-7b, mir-331, mir-26a-2, mir-1251, mir-135a-2

mir-33a, mir-331, mir-26a-2, mir-677, mir-135a-2, mir-1251

mir-331, mir-26a-2, mir-677, mir-135a-2, mir-1251

mir-33a, mir-331, mir-26a-2, mir-677, mir-135a-2, mir-1251

mir-331, mir-26a-2, mir-677, mir-135a-2, mir-1251

mir-331, mir-26a-2, mir-135a-2, mir-1251

BTA 6

mir-2284ab, mir-218-1

mir-2284ab, mir-218-1

mir-2284ab, mir-218-1

mir-2284ab, mir-218-1

mir-218-1

mir-2284ab, mir-218-1

BTA 7

mir-181c, mir-1271, mir-143, mir-145, mir-378a, mir-146a

mir-340, mir-1271, mir-145, mir-378a, mir-143, mir-146a

mir-340

mir-181c,

mir-181c, mir-143, mir-145, mir-378a, mir-146a

mir-181c, mir-143, mir-145, mir-378a, mir-146a

BTA 8

    

mir-455, mir-23b,, mir-24-1, let-7d

mir-31

BTA 10

mir-628

 

mir-628, mir-7859

mir-7859

mir-628, mir-7859

mir-628, mir-7859

BTA 12

      

BTA 13

mir-499

 

mir-1388, mir-6123, mir-296, mir-499

 

mir-6123, mir-296, mir-499

 

BTA 14

mir-151, mir-30d, mir-30b

mir-151, mir-30d, mir-30b,

mir-151, mir-30d, mir-30b

mir-151, mir-30d, mir-30b

mir-151, mir-30d, mir-30b

mir-151, mir-30d, mir-30b

BTA 15

  

mir-34b, mir-34c, mir-670, mir-129-2, mir-130a

 

mir-34b, mir-34c, mir-670, mir-129-2, mir-130a

 

BTA 16

mir-34a

   

mir-34a, mir-29b-2, mir-29c

 

BTA 18

let-7e, mir-125a, mir-138-2, mir-140, mir-99b

 

mir-769, mir-99b, let-7e, mir-125a

mir-99b, let-7e, mir-125a

mir-769, mir-99b, let-7e, mir-125a

mir-138-2, mir-140, mir-769, mir-99b, let-7e, mir-125a

BTA 19

 

mir-423, mir-196a-1, mir-10a, mir-338, mir-6516

mir-423, mir-196a-1, mir-10a, mir-338

, mir-423, mir-196a-1, mir-10a, mir-338

 

mir-423, mir-196a-1, mir-10a, mir-338

BTA 20

mir-449a, mir-582,

mir-582, mir-449a

mir-582

mir-582, mir-449a

mir-582, mir-449a

mir-582, mir-449a

BTA 21

mir-184, mir-7-1, mir-345, mir-127, mir-432, mir-136, mir-370, mir-379, mir-411a, mir-380, mir-411b, mir-758, mir-494, mir-543, mir-495, mir-376e, mir-376c, mir-376d, mir-376b, mir-376a, mir-1185, mir-381, mir-487b, mir-541, mir-655, mir-487a, mir-382, mir-134, mir-154a, mir-154b, mir-154c, mir-377, mir-541, mir-3957, mir-412, mir-369, mir-410, mir-656, mir-342, mir-382, mir-411c, mir-495, mir-665, mir-493, mir-485

mir-1185, mir-345, mir-127, mir-432, mir-136, mir-370, mir-379, mir-411a, mir-380, mir-411b, mir-758, mir-494, mir-543, mir-495, mir-376e, mir-376c, mir-376d, mir-376b, mir-376a, mir-1185, mir-381, mir-487b, mir-541, mir-655, mir-487a, mir-382, mir-134, mir-154a, mir-154b, mir-154c, mir-377, mir-541, mir-3957, mir-412, mir-369, mir-410, mir-656, mir-342, mir-382, mir-411c, mir-495, mir-665, mir-493, mir-485

   

mir-7-1

BTA 22

  

mir-135a-1, mir-191, mir-425

mir-26a-1, mir-138-1, mir-135a-1, let-7 g, mir-191, mir-425, mir-128-2

  

BTA 23

mir-133b, mir-2285ad

 

mir-133b, mir-2285ad

mir-133b

mir-133b, mir-2285ad

mir-2285ad

BTA 24

     

mir-1-2, mir-133a-2

BTA 25

mir-106b, mir-25, mir-93

   

mir-106b, mir-25, mir-93

mir-193b

BTA 26

mir-146b, mir-202

mir-146b, mir-202

mir-146b, mir-202

mir-146b, mir-202

mir-146b, mir-202

 

BTA 27

mir-383

mir-383

  

mir-383

 

BTA 29

mir-194-2, mir-192

   

mir-708, mir-194-2, mir-192

 
  1. The names and locations of goat miRNA precursors identified during this study were compared with bovine miRNA expressed during lactation [44] and localized in QTL associated with milk (http://www.animalgenome.org).