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Figure 1 | BMC Genomics

Figure 1

From: Genome-wide investigation of mRNA lifetime determinants in Escherichia coli cells cultured at different growth rates

Figure 1

Cistron position-dependent half-life, for polycistronic mRNAs and four growth rates. A boxplot distribution of log2 ratios of the cistron half-lives at positions 2, 3 and 4 versus the half-life of the first cistron is shown, for the four growth rates (μ = 0.10, 0.20, 0.40 and 0.63 h−1 in black, blue, red and green, respectively). Only operons with four cistrons are represented in this figure (47 operons). This figure is representative of all the operons of other sizes. List of the 47 operons of four genes used for this figure: appCB-yccB-appA, artPIQM, asnC-mioC-mnmG-rsmG, bcsABZC, bioBFCD, creABCD, deoCABD, ecpBCDE, fhuACDB, frdABCD, galETKM, hemCDXY, hofMNOP, hscBA-fdx-iscX, idnDOTR, iscRSUA, motAB-cheAW, mutY-yggX-mltC-nupG, nagBACD, nrdHIEF, osmF-yehYXW, pdxB-usg-truA-dedA, pepQ-yigZ-trkH-hemG, potFGHI, relA-mazEFG, rpoE-rseABC, rpoZ-spoT-trmH-recG, rpsF-priB-rpsR-rplI, rpsP-rimM-trmD-rplS, smtA-mukFEB, tatABCD, tauABCD, tgt-yajC-secDF, thrLABC, xseB-ispA-dxs-yajO, ybeZYX-lnt, ybgC-tolQRA, ybjC-nfsA-rimK-ybjN, ycaI-msbA-lpxK-ycaQ, yciSM-pyrF-yciH, yejABEF, ygfB-pepP-ubiH-visC, yheO-tusDCB, yihXY-dtd-yiiD, yjjB-dnaTC-yjjA, yqjCDEK and yrdD-tsaC-aroE-yrdB.

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