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Table 1 X. dendrorhous ORFs with the highest expression levels and maximum expression fold-changes among the four conditions

From: Codon usage and codon context bias in Xanthophyllomyces dendrorhous

ORF

RPKM

ORF

Fold-change

Cytochrome c oxidase family protein

38,981 (S18)

MFS polyamine transporter

273 [S72/G72]

Carbohydrate-binding module family 13 protein

34,225 (S72)

Glycoside hydrolase family 3 protein

236 [G18/S72]

Hsp10-like protein

26,138 (S18)

NAD-dependent formate dehydrogenase

231 [G18/G72]

Lipid droplet-associated perilipin protein

22,038 (G18)

DUF895 domain membrane protein

101 [S72/G18]

F-type H -transporting ATPase subunit J

21,800 (S72)

Carbohydrate-binding module family 13 protein

98 [G18/S72]

FK506 binding protein

20,367 (S18)

Isocitrate lyase

85 [G18/S72]

Probable GRX1-glutaredoxin

16,503 (S18)

Transcriptional regulator

83 [G72/G18]

Eukaryotic ADP ATP carrier

16,209 (G18)

Hsp10-like protein

82 [G18/S72]

Glucose oxidase

11,505 (S72)

MFS general substrate transporter

82 [G18/S72]

D-lactate dehydrogenase oxidoreductase protein

9,983 (G72)

NADPH2 dehydrogenase

72 [S72/S18]

  1. ( ): condition in which the highest RPKM value was observed. [ ]: condition in which the highest/lowest RPKM values were observed.