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Table 2 GC content and TFBS for cofactors in dataset

From: NF-κB and IRF pathways: cross-regulation on target genes promoter level

Gene name

GC %

AP-1

SP1

IRF1

64.70

5(5)

11(24)

IRF2

61.50

10(11)

11(25)

IRF3

58.90

5(5)

8(21)

NFKB1

55.50

10(11)

8(17)

NFKB2

51.90

6(7)

9(22)

REL

61.30

4(4)

17(41)

RELA

65.70

5(6)

11(18)

RELB

56.40

9(11)

13(34)

  1. GC content and counts of SP1 and AP-1 binding sites in promoter region of human genes encoding the analyzed transcription factors. Numbers in parentheses are the counts of overlapping motifs.