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Table 4 RT-qPCR primers used in this study

From: Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype

Gene

Primer name

5′-3′ Sequence

R 2

Efficiency

cel7a

qPCR-cel7a-F

CCGAGCTTGGTAGTTACTCTG

0.990

0.98

qPCR-cel7a-R

GGTAGCCTTCTTGAACTGAGT

xyn2

qPCR-xyn2-F

CAACCAGCCGTCCATCATCG

0.993

0.97

qPCR-xyn2-R

ATCGTCCCGAGCGTCAGG

xyr1

qPCR-xyr1-F

CCATCAACCTTCTAGACGAC

0.987

0.99

qPCR-xyr1-R

AACCCTGCAGGAGATAGAC

cre1

qPCR-cre1-F

GTCTGAGAAACCTGTCCCTG

0.996

0.91

qPCR-cre1-R

GGCTAATGATGTCGGTAAGTG

tef1

qPCR-tef1-F

CCACATTGCCTGCAAGTTCGC

0.995

0.95

qPCR-tef1-R

GTCGGTGAAAGCCTCAACGCA