Table 3 Primary functional classification on differentially expressed genes of Dajiao with fold changes > or < 2-fold

Regulation of transcription

GSMUA_Achr8G25220_001

0.00

74.93

Inf

sp|Q9FDW1|MYB44_ARATH Transcription factor MYB44

GSMUA_Achr6G15840_001

0.00

244.92

Inf

sp|Q9SKD9|WRK46_ARATH Probable WRKY transcription factor 46

GSMUA_Achr7G21780_001

3.92

134.30

5.08

sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68

GSMUA_Achr5G07590_001

3.49

98.07

4.79

sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68

GSMUA_Achr6G32330_001

13.18

144.11

3.35

sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68

GSMUA_Achr7G06910_001

92.07

2467.93

4.67

sp|Q8VY90|EF105_ARATH Ethylene-responsive transcription factor ERF105

GSMUA_Achr5G21050_001

8.88

112.43

3.54

sp|Q40476|ERF1_TOBAC Ethylene-responsive transcription factor 1

GSMUA_Achr2G07300_001

89.60

623.19

2.69

sp|Q6K7E6|ERF1_ORYSJ Ethylene-responsive transcription factor 1

GSMUA_Achr8G06870_001

16.66

182.33

3.38

sp|Q9LW49|ERF4_NICSY Ethylene-responsive transcription factor 4

GSMUA_Achr4G33270_001

16.25

187.60

3.42

sp|Q9FE67|ERF80_ARATH Ethylene-responsive transcription factor 9

GSMUA_Achr3G01650_001

31.65

237.25

2.80

sp|Q8H1E4|RAP24_ARATH Ethylene-responsive transcription factor RAP2-4

GSMUA_Achr7G11200_001

23.57

226.28

3.11

sp|Q2R2W1|ADO3_ORYSJ Adagio-like protein 3

GSMUA_Achr8G21550_001

37.31

181.43

228.12

2.24

2.50

sp|Q9SLH0|EIL1_ARATH ETHYLENE INSENSITIVE 3-like 1 protein

GSMUA_Achr9G17080_001

176.04

810.19

2.09

sp|Q9SLH0|EIL1_ARATH ETHYLENE INSENSITIVE 3-like 1 protein

GSMUA_Achr6G32910_001

61.08

345.11

352.14

2.46

2.41

sp|Q688R3|C3H33_ORYSJ Zinc finger CCCH domain-containing protein 33

GSMUA_Achr11G02890_001

407.44

97.21

−2.17

sp|A6MMN9|RPOA_DIOEL DNA-directed RNA polymerase subunit alpha

GSMUA_Achr3G04360_001

195.09

7.20

−4.82

sp|Q9LM15|RA213_ARATH Ethylene-responsive transcription factor RAP2-13

Response to stress

GSMUA_Achr7G05900_001

4.55

474.74

496.55

6.76

6.74

sp|Q9LWV3|DRE1D_ORYSJ Dehydration-responsive element-binding protein 1D

GSMUA_Achr6G14750_001

1.82

97.73

5.72

sp|Q9SYM2|STHY_ARATH Probable salt tolerance-like protein At1g78600

GSMUA_Achr5G07340_001

1.61

80.13

5.62

sp|Q10MX1|P2C32_ORYSJ Probable protein phosphatase 2C 32

GSMUA_Achr6G13020_001

9.58

343.69

4.98

sp|Q8LGD5|MKS1_ARATH Protein MKS1

GSMUA_Achr2G13410_001

16.68

246.83

243.05

3.87

3.76

sp|Q42430|ZFP1_WHEAT Zinc finger protein 1

GSMUA_Achr3G11070_001

208.08

1667.24

2.91

sp|Q84PD8|SAP11_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 11

GSMUA_Achr10G22580_001

46.34

325.56

2.74

sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1

GSMUA_Achr7G27650_001

234.49

1072.10

2.10

sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A

GSMUA_Achr7G00180_001

656.47

2428.04

1.76

sp|F6H7K5|THI42_VITVI Thiamine thiazole synthase 2, chloroplastic

GSMUA_Achr8G20530_001

547.88

145.12

−2.04

sp|P11432|ELI_PEA Early light-induced protein, chloroplastic

GSMUA_Achr7G20770_001

681.33

129.38

−2.53

sp|Q9MA41|CTL1_ARATH Chitinase-like protein 1

GSMUA_Achr3G03820_001

180.03

20.24

−3.28

sp|Q00874|DR100_ARATH DNA-damage-repair/toleration protein DRT100

GSMUA_Achr1G17220_001

758.94

19.48

−5.40

sp|Q9SW93|SCA_LILLO Stigma/stylar cysteine-rich adhesin

Protein modification

GSMUA_Achr9G08750_001

21.54

308.06

3.74

sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25

GSMUA_Achr6G25670_001

128.52

845.34

1563.67

2.68

3.48

sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25

GSMUA_Achr7G01430_001

52.60

429.81

2.95

sp|P05332|YP20_BACLI Uncharacterized N-acetyltransferase p20

GSMUA_Achr2G13700_001

15.09

110.79

2.79

sp|Q10469|MGAT2_HUMAN Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

GSMUA_Achr6G18960_001

455.83

2228.34

2.19

sp|P0CH33|UBQ11_ARATH Polyubiquitin 11

Signal transduction

GSMUA_Achr9G04780_001

0.00

111.31

Inf

sp|O22932|CIPKB_ARATH CBL-interacting serine/threonine-protein kinase 11

GSMUA_Achr4G16550_001

13.05

123.18

3.19

sp|Q94BT2|AIR12_ARATH Auxin-induced in root cultures protein 12

GSMUA_Achr1G03980_001

58.82

544.78

3.15

sp|Q9ZPX9|KIC_ARATH Calcium-binding protein KIC

GSMUA_Achr3G23000_001

66.66

705.10

3.41

sp|Q9ZPX9|KIC_ARATH Calcium-binding protein KIC

GSMUA_Achr6G35120_001

299.39

1905.08

2.58

sp|Q9LNE7|CML7_ARATH Calmodulin-like protein 7

Cell wall organization and biogenesis

GSMUA_Achr7G21070_001

12.21

113.07

3.14

sp|Q67VS7|CSLA9_ORYSJ Probable mannan synthase 9

GSMUA_Achr6G05390_001

50.30

294.18

2.46

sp|Q9LR44|U75B1_ARATH UDP-glycosyltransferase 75B1

GSMUA_Achr3G05220_001

0.00

108.92

Inf

sp|Q38910|XTH23_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 23

GSMUA_Achr3G26220_001

349.74

19.19

−4.32

sp|Q8LER3|XTH7_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 7

GSMUA_Achr7G22100_001

376.14

6.12

−6.08

sp|Q0DHB7|EXPA4_ORYSJ Expansin-A4

Transport

GSMUA_Achr10G25070_001

42.74

561.50

3.66

sp|Q9CR62|M2OM_MOUSE Mitochondrial 2-oxoglutarate/malate carrier protein

GSMUA_Achr7G16570_001

66.35

290.42

2.03

sp|P46032|PTR2_ARATH Peptide transporter PTR2

GSMUA_Achr1G22700_001

334.68

1346.56

1.93

sp|Q8VZ80|PLT5_ARATH Polyol transporter 5

Nucleosome assembly

GSMUA_Achr1G07160_001

64.61

491.53

2.84

sp|P0CG89|H4_SOYBN Histone H4

GSMUA_Achr7G12120_001

443.53

1635.08

1.76

sp|Q9M5W4|H1_EUPES Histone H1

Cell redox homeostasis

GSMUA_Achr3G25160_001

0.00

53.07

Inf

sp|Q84JR9|TTL4_ARATH TPR repeat-containing thioredoxin TTL4

Iron-sulfur cluster assembly

GSMUA_Achr9G07610_001

0.00

343.42

275.72

Inf

Inf

sp|Q6FJ73|CIAO1_CANGA Probable cytosolic iron-sulfur protein assembly protein 1

Proteolysis

GSMUA_Achr11G04410_001

1.46

120.93

6.34

sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1

Oxidation reduction

GSMUA_Achr7G26580_001

83.33

882.49

1084.18

3.35

3.57

sp|Q96558|UGDH_SOYBN UDP-glucose 6-dehydrogenase

RNA modification

GSMUA_Achr4G11450_001

61.95

416.78

2.64

sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7

Copper ion homeostasis

GSMUA_Achr3G16210_001

9685.89

33776.00

1.72

sp|Q40256|MT3_MUSAC Metallothionein-like protein type 3

Photosynthesis and photorespiration

GSMUA_Achr10G19930_001

210.99

18.46

−3.62

sp|O24045|RBS_MUSAC Ribulose bisphosphate carboxylase small chain, chloroplastic

Response to sucrose stimulus

GSMUA_Achr11G11670_001

233.57

3.50

−6.15

sp|Q9LZP9|CP122_ARATH Calvin cycle protein CP12-2, chloroplastic

Unknown

GSMUA_Achr2G22400_001

0.00

59.28

Inf

Putative uncharacterized protein

GSMUA_Achr10G24780_001

2.98

136.75

5.50

Putative uncharacterized protein

GSMUA_Achr6G10300_001

12.59

230.91

4.17

Putative uncharacterized protein

GSMUA_Achr2G22290_001

28.69

317.86

3.39

Putative uncharacterized protein

GSMUA_Achr5G01760_001

40.45

432.42

3.35

Putative uncharacterized protein

GSMUA_Achr3G28910_001

263.62

1904.50

2.75

Putative uncharacterized protein

GSMUA_Achr6G16830_001

61.64

364.03

2.45

Putative uncharacterized protein

GSMUA_Achr8G05250_001

163.34

933.13

2.41

Putative uncharacterized protein

GSMUA_Achr4G24680_001

409.42

52.57

−3.08

Putative uncharacterized protein

GSMUA_Achr8G30530_001

245.64

28.47

−3.20

Putative uncharacterized protein

GSMUA_Achr6G01490_001

158.51

11.52

−3.90

Putative uncharacterized protein

GSMUA_Achr9G12290_001

65.93

0.00

-Inf

Putative uncharacterized protein

GSMUA_Achr9G26820_001

65.88

0.00

-Inf

Putative uncharacterized protein