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Table 2 Summary statistics of read counts and coverage

From: Transcriptome sequencing and annotation of the polychaete Hermodice carunculata (Annelida, Amphinomidae)

Total number of reads

426,555,924

Number of read used reads for assembly

141,684,860 (33.22%)

Number of unused reads

28,4871,064 (66.78%)

Number of non-redundant transcripts (>200 bp)

525,989

Number of non-redundant trasncripts with back-aligned reads (>200 bp)

525,939

Number of transcripts with coverage fpkm >1

176,412

Number of transcripts with coverage fpkm >5

49,690

Average coverage for contigs from filtered dataset 2 (fpmk)

15.279

Average number of reads mapped per contig (with coverage fpkm >5)

1644

  1. bp = base pair; fpkm = paired-reads per kilobase per million; contig = contiguous overlapping sequence read from assembly.